Tripterygium wilfordii (thunder duke vine): 119997659
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Entry
119997659 CDS
T07256
Name
(RefSeq) WD-40 repeat-containing protein MSI4-like
KO
K10752
histone-binding protein RBBP4
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl03082
ATP-dependent chromatin remodeling
twl03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
119997659
03083 Polycomb repressive complex
119997659
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
twl03036
]
119997659
Chromosome and associated proteins [BR:
twl03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
119997659
Histone modification proteins
HAT complexes
HATB complex
119997659
HDAC complexes
Sin3A-HDAC complex
119997659
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
119997659
PRC2.2
119997659
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
119997659
Heterochromatin formation proteins
Other heterochromatin formation proteins
119997659
Chromatin remodeling factors
NuRD complex
119997659
NuRF complex
119997659
NuRF complex (fruit fly)
119997659
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
CAF1C_H4-bd
WD40_Prp19
Beta-prop_EIPR1
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WD40_WDHD1_1st
Beta-prop_RIG_2nd
Beta-prop_EML
WDR55
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_IFT122_1st
Beta-prop_WDR35_TULP_N
Beta-prop_SPT8
Beta-prop_WDR90_POC16_2nd
WD40_RFWD3
ANAPC4_WD40
WD40_MABP1-WDR62_1st
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
119997659
NCBI-ProteinID:
XP_038700742
LinkDB
All DBs
Position
4:2907322..2925553
Genome browser
AA seq
489 aa
AA seq
DB search
MDPPAPKKRGRKPKPKDDRKDEQGNKMKEAKKSQPPTVDETYTQWKSLVPVLYDWLANHN
LVWPSLSCRWGPQLDVATYKNRQRLYLSEQTDGSVPNTLVIANCEVVKPRVAAAEHISQF
NEEARSPFVKKYKTIIHPGEVNRIRELPQNANIVATHTDSPDVLIWDVEAQPNRHAVLGA
ANSRPDLILTGHQDNAEFALAMNPAEPYVLSGGKDKSVVLWSIQDHITTSATDPSTAKSS
SSGASIIKQDGNDKAADAPTVGPRGIYNGHDDTVEDVTFCPSSAQEFCSVGDDSCLIFWD
ARTGSTPVIKVQKAHNADLHCVDWNPHDGNLILTGSADNSVHMFDRRNLTSNGVGSPICK
FEGHKAAVLCVQWSPHKSSVFGSSAEDGLLNIWDYDKVGKQSESASKSPSSPAGLFFQHT
GHRDKVVDFHWNASDPWTIVSVSDDCETTGGGGTLQIWRMSDLLYRPEDEVLAELERFKA
HVVECAAKT
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atggatcctccagccccgaaaaagagaggccgaaaacccaagcccaaggacgacaggaaa
gacgaacaaggcaacaagatgaaagaggccaagaaatcacaaccacctaccgtcgacgag
acctacactcagtggaagagtctcgttcccgttctctacgactggctcgctaatcataac
cttgtttggccttctctctcctgccggtggggcccacagcttgatgttgcaacctacaag
aatcgtcaacgcctttacctgtctgagcagactgatggcagtgttccaaatactctggtt
attgcaaattgtgaagttgtcaaaccgagagttgcagctgcagagcatatatctcagttc
aatgaagaagcgcgatcaccatttgtaaagaaatacaagacaatcattcatccaggagag
gtgaacagaatcagggagctcccacagaatgccaatattgtggctactcatactgacagt
cctgatgttcttatatgggatgttgaagcacaaccgaaccgccatgctgtccttggagct
gcgaattcacgccctgatttgattttgactggacatcaagataatgctgaattcgctctt
gcaatgaatcctgctgaaccctatgtactctctggagggaaagacaagtcagtagttttg
tggagtattcaggaccatataaccacatcagccactgacccatctactgccaagtcttca
agttctggtgcatcaattattaaacaagatggaaatgataaagctgctgatgcccctact
gtgggacctcggggtatctacaatgggcatgatgacacggttgaagatgtgactttttgt
ccatccagtgcacaggaattttgcagtgtaggtgatgattcttgccttatattttgggat
gcacgaacaggctctactccagtcatcaaggttcaaaaggcacataatgctgatctccat
tgtgttgattggaatccccatgatggtaatcttatcttgactgggtcggcagataattct
gttcacatgtttgatcgccggaatcttacttctaatggagttggatcacctatctgcaaa
tttgagggtcacaaagctgctgttctttgtgttcaatggtctccacacaagtcatctgtg
tttggaagttctgcagaggatggtctcttaaacatttgggattatgataaggttggcaaa
cagtctgagagtgcatcaaaatcccccagttctcctgctggcttgtttttccagcatact
ggtcacagggacaaagtcgtcgacttccattggaatgcatctgatccttggactattgtt
agtgtgtctgatgattgtgaaaccactggtggaggaggaacattgcagatttggcgcatg
agtgatttgctgtataggccagaagatgaagttttggcagagctagagaggttcaaagcc
catgtggttgaatgtgctgctaaaacttga
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