Tripterygium wilfordii (thunder duke vine): 119997895
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Entry
119997895 CDS
T07256
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 52-like isoform X1
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
twl03019
]
119997895
03041 Spliceosome [BR:
twl03041
]
119997895
03036 Chromosome and associated proteins [BR:
twl03036
]
119997895
Enzymes [BR:
twl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
119997895
Messenger RNA biogenesis [BR:
twl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
119997895
mRNA cycle factors
Common to processing body (P body) and stress granule
119997895
Spliceosome [BR:
twl03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
119997895
Chromosome and associated proteins [BR:
twl03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
119997895
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
119997895
NCBI-ProteinID:
XP_038701049
LinkDB
All DBs
Position
4:complement(15919528..15927948)
Genome browser
AA seq
583 aa
AA seq
DB search
MAWVPRTVDSDRRPTRPNYVPPPFRAHNSGSDSFAFSDESARHQLGRNGASYGRGRGRGG
RRGRGWNHLRGPFNQNQNREDPFNDLSEKFDELEVSGEGITNGSSDTAINFDAYEDIPVE
ASGSDVPPAVDTFADIDLGDALNRNIKRCKYVRPTPIQRHAIPIAVAGRDLMACAQTGSG
KTAAFCFPIISGILKNQGMVLGRWNQVAYPTALILSPTRELASQVIQDEAKKFAYETSIK
IAVVYGGAPIMQQFRNLDKGVDILVAAPGRLIDMVERGKVSFKMVKYLVLDEADRMLDMG
FEPQIRKIVQQMGMPPPGSRQTLLFSATFPEEIQRLASDFLSNYIFLTVGRVGSSTNLIA
QKVELVEDPDKRAHLIKLLQTERENGSNGKALTLVFVETKKGADSLEHWLLKNGLPAIAI
HGDKIQMEREHALRSFKSGATPILVATDVASRGLDIPHVAHVINFDLPQDIDGYVHRIGR
TGRAGKSGVATAFFAEKNMALAKALAELMKESNQEVPAWLTEYAASPFYGGGSSRSNRSG
RYGGSSFGGYDFRTENQYDSYTYTEPESFSTFGHESVVATGWE
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atggcttgggtccctcgcactgtcgattcagaccgtcgccccacgcgacccaactacgtc
ccaccgcctttcagagcccacaacagtggctctgactcgtttgcgttttctgatgagtca
gctcggcatcaactgggtcgaaatggggcaagttacggtcgcggacgtggacgtggaggt
cggcgtggacgtgggtggaaccaccttagaggaccctttaaccagaatcaaaacagggaa
gacccatttaacgatttatctgagaaatttgacgagctggaggttagtggagaaggtatc
acaaatgggtcatcggacactgcaatcaacttcgatgcatatgaggatatcccagtggag
gcgagtggctcggacgtgcctccagcggtcgatacatttgctgatatcgaccttggagat
gctttgaaccgaaacataaagcgttgcaagtatgtgagacccactccaatccagcgccat
gcgatacccatagcggtcgccgggcgtgacttgatggcctgcgctcagaccgggtctggt
aagacagctgcgttctgcttccctatcatcagcgggattctgaagaatcagggtatggtg
ttgggtcgttggaaccaggttgcataccctactgctctcattttgtcaccgaccagagag
ctggcgagtcaggtgatacaagatgaggctaagaagtttgcttatgaaacttcgattaag
attgctgttgtttatggaggagcacccatcatgcagcagtttcgcaacctagataaaggt
gttgacatcttggttgctgcccctgggcgcttaattgatatggttgagagaggaaaggtt
tcttttaaaatggttaaatacctggttttagacgaggctgacagaatgttagatatgggt
tttgagcctcagattcgcaaaattgtccagcaaatgggcatgcctccccctggttcaagg
cagacattgcttttcagtgcaacctttcctgaagaaattcagaggcttgcatctgatttt
ctttcaaactacatatttctgactgttggaagggttggctcgagtactaatttgattgca
caaaaggttgaattagttgaggatccagacaaaagggcccatcttataaaacttcttcaa
accgaaagggaaaatgggagcaatggcaaggctttaacccttgtttttgtggagacaaag
aagggagctgattcacttgagcattggctgttgaagaatggtcttccagcaatagcaatt
catggtgataagattcaaatggagagagaacatgctttgagatcattcaagagtggcgcg
actccaattctggtggctacagatgttgcttcaagaggtctagatattcctcatgttgca
catgtgatcaattttgacttaccccaagacatagatggctatgtccacaggattggccga
actggtcgtgctggtaaatctggtgtagcaactgccttcttcgctgagaagaatatggca
ctagcgaaggcccttgcagagctaatgaaggaatcaaaccaagaagttcctgcttggctt
accgaatatgctgcgagtccattctatggtggtggcagcagtcgatccaatcgatctgga
agatatggtggcagctcatttggtggatatgattttcgaactgagaatcaatacgattca
tacacatacactgaaccagagtctttcagcacttttggtcacgaatctgtggtcgctact
ggctgggagtag
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