Tripterygium wilfordii (thunder duke vine): 119998071
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Entry
119998071 CDS
T07256
Name
(RefSeq) SNF2 domain-containing protein CLASSY 2-like
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
119998071
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
twl03400
]
119998071
DNA repair and recombination proteins [BR:
twl03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
119998071
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
SAWADEE
Motif
Other DBs
NCBI-GeneID:
119998071
NCBI-ProteinID:
XP_038701210
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All DBs
Position
1:7255611..7264042
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AA seq
1309 aa
AA seq
DB search
MKRRRLYEPKHPFNAYPFEALSCGSWKAVEIIQIKDAAMNLHFMDGQHVIEEKGPIANLR
VRSRQAIVSDCTCFLRPGVDVCVLSPPRKTENSERGKLEPVKKESLDPVWTDAKISTIER
MPHVSHCSCRFFVHFYTNQGPLGSERGTLTKDTEEVGINQISIFQKLEQNACEDEFYRWS
SSEDCSMVQRTKLLLGKFLSDLTWLLAVSALKNVTFEVRSKQNKIVYQIVGIEDECCSPN
SDNHLHTMNFKVENDVLTPIMFKYVPLSAITASPASDMLEAGPLTYFDVHSLRRSKRRQV
QPDRFLGCDVPSELEIGIVRTLPYKTGKYIEEEELVFSSPRMFSINSSISPEPAQHGLKV
HSPVLNPCKDLIVYQRRNKSTKVTSGSANEGEHHIPLAIVPAPNEIHLLALKIDHLETKI
PENDTRQVDEIPLKKSNTKGAPVVQRKNNVSKLKNKRSKSRLEENASQSNPQSRKYSSVQ
SRGDDNSELEDMVSESKWKGKASQSNFQSRRYSSVQSKRDDYSEPFAFRRNTLSDGAYNK
IINSYMKNIDSSKTEEPRKLDECKEITGNCSEQRKEMDSPEEEEEEVSETEMLWKEMEMA
MASAYVLEDNEVSSVARSTKSAEEAPEGCRHYYILDEEVGILCRLCGTVKTEIKYVTPPF
LENAGCTARPFNEEAAEHMQVEDEDLDFVCNDGSPDTISPENKDNVWALIPELGKKLRSH
QKKAFEFLWENIAGSLMPAQMEQASKKPASKKKIGGCVISHSPGAGKTFLIIAFLVSYLK
LFPGAKPLVLAPKTTLYTWYKEFIKWEIPIPVHLIHGRRTYRVFKSKKVTIRGGPKPSLD
VMHVIDCLDKIQKWHEQPSVLVMGYTSFLSLMRENSKFAHRRYMAKVLRESPGLLVLDEG
HNPRSTKSRLRKALMKVETDLRVLLSGTLFQNNFCEYFNTLCLARPKFVNEVLKRDPKYK
RRKKGSKKAFHLLESRARKFFIDNIGKKIDSSGGDDRIEGINMLRNLTSGFIDVHENANS
ENLPGLQLYTLLMNSTEIQQGVVSKLQTIMDSFKGYPLELELLITLASIHPSLVRTSNCA
KKFFTPEELVKLEELKLDFRKGSKVMFVLNLVYRVIQKEKVLIFCHNIAPINLFVGLFER
IFQWQKGREVLVLTGDLELFDRGQVMDRFEVAGGPSRVLLASITACCEGISLTAASRVIM
LDSEWNPSKTKQAIARAFRPGQQKMVFVYQLLATGSLEEDKYRRTTWKEWVSSMIFSEEF
VEDPSKWQAEKIEDDVLREMVEEDRAKSFNMIMKNEKASTSGSATRIVQ
NT seq
3930 nt
NT seq
+upstream
nt +downstream
nt
atgaagagaaggcgtttatatgagcccaaacatccatttaatgcttatccctttgaggca
cttagctgtggctcatggaaagccgtggaaatcatacaaatcaaggatgcagctatgaac
cttcacttcatggatggtcagcatgtgattgaggagaaaggtccaattgcaaacctccgt
gtaaggtcgaggcaagctatagtatccgactgcacctgctttttgagacctggggttgat
gtttgtgtgctttcgccccctcgtaaaacagaaaattcagagagaggaaaattagaacct
gtaaagaaagaaagtttagaccctgtgtggactgatgctaaaataagtaccatagagagg
atgccgcatgtatctcactgctcttgccggttctttgttcatttctatactaatcaaggt
cctctaggttcggagaggggaacacttactaaggacactgaagaagttggcatcaatcaa
atttctatctttcaaaagcttgaacaaaatgcctgtgaagatgagttttaccgttggagt
tcatcagaggattgctctatggttcaaagaacaaaattgctgttggggaaattcttatct
gatctaacatggctgcttgctgtatctgctttgaagaatgtcacctttgaggtaagatca
aagcaaaataagattgtctatcaaatcgtgggcatcgaagatgaatgttgttcaccaaac
tctgataatcaccttcatactatgaatttcaaagtagagaatgatgttttaacacctatc
atgtttaaatatgttccccttagtgccattacggcaagtcctgctagtgatatgcttgaa
gctggaccgttgacatactttgatgttcatagcttgaggcgctctaaacgtcgacaagta
cagcctgatcgtttccttggctgtgatgttccttcagagttggaaattggcattgttcga
acactgccatacaagactgggaaatatatagaagaggaagaattggttttttcctcacca
cgcatgttcagtataaattcaagtatttcaccggagcccgctcagcatggactgaaggtc
cattctcctgtgttaaatccctgtaaggatctaatagtgtaccaacgcaggaacaaatcg
acaaaagtgacatcaggttctgctaatgaaggagaacatcacattccacttgcaattgtt
cctgctcctaatgaaattcatctactagccctcaaaattgatcatcttgagaccaagatc
cctgaaaatgatacaagacaggttgatgaaattccattgaagaaatctaatacaaagggt
gcccctgttgtgcagaggaagaataatgtttcaaaattgaaaaacaagaggtctaagagt
agattggaagaaaatgcttctcagtcaaatcctcaaagtagaaaatattcttcggtgcag
tcaagaggggacgataattcagaattggaagatatggtgtctgaaagtaaatggaaggga
aaagcttctcagtcgaattttcagagtagaagatattcctctgtgcagtcaaaaagagat
gattactcagaaccatttgcttttaggagaaacactttaagcgatggcgcttacaataaa
ataattaattcatacatgaagaatattgattcctcaaaaacagaagagcctcgtaaactt
gatgagtgcaaagagataacaggaaactgctcagaacagaggaaggaaatggactctcct
gaagaagaagaagaggaagtctcagaaacagaaatgttatggaaagaaatggaaatggcc
atggcatcagcttatgttctcgaggacaatgaggtttcaagtgttgcaaggtccaccaag
tctgcagaagaagcacctgaaggttgccggcactattacatattggatgaagaagttgga
atactttgccggttatgtggtaccgtgaagactgaaataaaatatgttaccccgcctttt
ctggaaaatgcaggctgtaccgctaggccattcaatgaagaagccgcagagcatatgcaa
gttgaggatgaagacttggattttgtctgcaatgatggttcgcctgatacgatttcacca
gagaataaggataatgtctgggctttaatccccgagcttggaaagaagttacgctcacat
cagaaaaaagcttttgaatttctgtgggaaaacattgccggttctttgatgcctgcacaa
atggaacaagcatccaagaaacctgcatccaagaagaagataggtggttgtgttatatct
cattctcctggagccggaaaaacttttctgatcattgcattcctcgtcagctacttgaag
ttattcccgggtgcaaagcctttagtccttgccccaaagacaactctctatacctggtac
aaggaatttatcaagtgggaaattcctataccagttcatctaatccatggccgtagaacc
tacagagtctttaagagtaaaaaagtaacaattcgaggaggtccgaagcccagtctagat
gttatgcatgttatagattgccttgataaaatacaaaagtggcatgaacaacccagtgtc
cttgtcatgggctatacttctttcctatcattaatgcgagaaaattctaaatttgcgcac
agaagatatatggccaaagtgctgagagaaagtcctggcctcttggtgctggatgaaggt
cacaaccccaggagtacaaaatcaagattgaggaaggctttgatgaaggtcgaaactgac
ctgagagtgttgctttcaggtacattatttcaaaacaatttctgtgaatatttcaacaca
ctttgcttggcaagacccaagtttgtcaatgaagtgttgaaacgtgacccgaaatacaag
aggaggaagaagggttcaaaaaaggcattccatttgttagaatcaagggcaaggaagttc
ttcatagacaacattgggaagaaaattgattcaagtggaggtgatgatagaatcgaggga
ataaacatgctaagaaacctgactagtggatttattgatgtacacgaaaatgccaattca
gaaaatcttcccggtttacaactttacaccttgctgatgaattcaacagaaatacagcag
ggagtagtgtcaaaacttcagaccattatggattcattcaagggttatccacttgaattg
gagcttctgataactcttgcatccattcatccttcgttggttagaacttcaaattgtgcc
aagaaattttttaccccagaagaattagttaagcttgaggagctgaagcttgacttcagg
aaaggttctaaggtgatgtttgttctgaatcttgtttatcgtgtcatccagaaggagaag
gttctgatattctgccacaacattgcacccatcaacttatttgtaggattgtttgagaga
atttttcagtggcagaagggaagagaagttttggtcctcacaggggatttagagctattt
gatagaggacaagtgatggataggtttgaggtagctggagggccgtcaagggtcctgctt
gcttcaattacagcttgttgtgaaggcattagtttgacagcggcttcacgggtgattatg
ttggattcagagtggaatccttccaagacaaagcaggctattgcacgggctttccggcct
ggtcagcaaaaaatggtttttgtatatcagctcttggcaacgggttcacttgaagaagat
aagtaccgtagaacaacctggaaggaatgggtatcaagcatgatctttagtgaggaattt
gttgaggacccttccaaatggcaagcagaaaaaattgaagatgatgttttaagggagatg
gtggaggaggacagggctaagtcttttaatatgataatgaaaaacgagaaagcttcaacc
agtggatcagcgactaggatcgtacaataa
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