Tripterygium wilfordii (thunder duke vine): 119998083
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Entry
119998083 CDS
T07256
Name
(RefSeq) exosome complex component RRP43-like
KO
K12586
exosome complex component RRP43
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
119998083
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
twl03019
]
119998083
Messenger RNA biogenesis [BR:
twl03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
119998083
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
YwcE
Motif
Other DBs
NCBI-GeneID:
119998083
NCBI-ProteinID:
XP_038701218
LinkDB
All DBs
Position
5:12360293..12363435
Genome browser
AA seq
303 aa
AA seq
DB search
MELPNDSGDLGSEMEVDAFRRLFPLRFYERHLAESIRPDARPLSRARDTTVALGAVASAN
GSALAKIGSTTMLAAIKMEVMTPSVELPDEGCIAIEFHMPPICSPLVRPGRPAEVAPVVS
KQLSDTILSSGMINLKELSLVSGKAAWMAYLDIYCLDADGALFDAALLSAVAAFSHLQIP
VVSLNDDGKIVMLSEEQDDGNLDKGAVNKEKRKIALSSIPFSLTCVLHKNYILADPTAEE
ESIMETVVTVVLDSSNQLVSLYKPGGPVLARTSVLQDCVALTRQRIKELQNILDEAISGM
EVD
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atggagctgccaaatgactctggggacttaggatcagagatggaggtcgatgcattcagg
agactcttccctcttcgcttctatgagcgccatcttgctgaatccatacgccctgatgcc
agacctctttctagagctagagataccacggtagccctaggggctgttgcatctgccaat
gggtctgcattagccaagattggttcaacaactatgttagctgctatcaaaatggaagtc
atgaccccttctgttgaattgcccgatgagggctgcatagctattgagttccacatgcct
ccaatctgttctccgcttgttaggcctggtaggccagctgaagtggcaccagttgtgtca
aagcagttgtccgacactatattgagttctggcatgatcaatttaaaggaattatcccta
gttagtggaaaagctgcctggatggcatatctggacatttactgtttggatgcagatggt
gctctttttgatgctgcattgctgtccgcagttgccgcgttctctcatttgcaaattcca
gtagtttcactaaatgatgatggaaaaatagttatgctttccgaggaacaagatgatgga
aatttggataagggggcagtcaacaaggagaagagaaagatcgcattaagtagcattcca
ttctcactgacatgtgtacttcacaagaattacattttggcagaccccactgccgaggaa
gagtccatcatggaaactgttgtaacggtagttttggactcatcaaatcagcttgtgtct
ctatacaagcctggtggtccagttctggcccgtacatcagttctccaggattgtgttgca
ttaacaaggcagagaataaaggaacttcagaatattttagatgaggccatttctggcatg
gaggttgactaa
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