Tripterygium wilfordii (thunder duke vine): 119998118
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Entry
119998118 CDS
T07256
Name
(RefSeq) nucleolar protein 6 isoform X1
KO
K14544
U3 small nucleolar RNA-associated protein 22
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
119998118
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
twl03009
]
119998118
Ribosome biogenesis [BR:
twl03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
119998118
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nrap_D5
Nrap_D4
Nrap_D3
Nrap
Nrap_D2
Nrap_D6
Motif
Other DBs
NCBI-GeneID:
119998118
NCBI-ProteinID:
XP_038701271
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All DBs
Position
5:2859956..2874253
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AA seq
1053 aa
AA seq
DB search
MDSDGLAATDPTEIKVGELLKEVVLDHFPAFSKLVDDTVSAIKRAIAKIPDDLKVTADEA
PGFVRDIGADKVEFKFKKPKYIEIGGSYSIQCVTKPELNVDLFVRLPKECFLEKDYLNYR
YHAKRCLYLCIIKKYMKRKSSALRVEWSTLQNEARKPVLLVFPAEKLEVPGFFVRIIPTA
PSLFNISKLNVKRNNVRALNQGDVLQPTPIYNSSILEDMFLEENAEFVRKTFHGLRELRE
ALILLKVWARRRSSIHVHDCLNGFLISIILAYLATHDKINNSLKAVQIVRITLDFLATSK
LWSRGLYFKEQGQDCFPKEERMQYKEIFPVVICDSSSHVNLAYRMTSAGFIELQDEAHLA
LKCIQKCIDGGFDELFMTKVDFPAKYDYCIRLKLQGNSEVYASGFCLDDECWRLYERKVY
SLLRQGLTDRVNFIRVVWRNTASGCGIENGLSTLDREQLLIGISVSSVEKAFRVVDVGPN
AENKDEALKFRKFWGEKAELRRFKDGTIAESTVWETEQWTRHLILTRIVECILQRHLSLP
KERIVQMTDQLDFSLLNGVKDSMSHSGGLLGALEVLSKRLRLIEDIPLRVSSVQPLDSAF
RLTSVFLPEPHPLVNEKGNLTRLRTQCPSCIQPLEVMIQLEGSGNWPMDDIAIKKTKTAF
LLKIGESLEHKWGMTCTATEDDVDVFFSGYAFRLKILHERGLSLLKREVGSNQLKRVPST
DKKLFISGQHSNMINGLQGQYPIYGHVVRLAKRWVASHLFSACLVEEAVELLVAYLFLKP
LPFNAPFSRITGFLRFLRLLADYDWTFSAMVVDINNDLTLYDKKEINDNFALSRKVYEEN
PQNVNPAMFLATAYDKESEAWTRCAPNSLDLRRLVAYARSSADLLTKLVLQDQTDSYRWE
CLFRTPLNNYDAVVLLHRDRLPYPKRLLFPSELNQGKMLARGNVCKNFHPFILAQDLKGS
YKELQNQLLVNFDPLRCFIGDLEKEFPNTFKLWYDFLGGDAIGLTWEKPHSKKREREETT
EDNKNPVEALKAVGRIGKGFVRSVYFLKAPRLS
NT seq
3162 nt
NT seq
+upstream
nt +downstream
nt
atggattccgatggcttggcggcgacagacccgacagaaatcaaggtaggcgagctgtta
aaggaggtcgtgctcgaccatttccctgccttctccaagctcgtcgatgacactgtttct
gccatcaaacgcgccatagctaaaatccccgacgacctcaaggttactgcagatgaggct
ccgggatttgtgagagatattggtgctgacaaagtagagttcaaatttaagaaaccgaag
tatattgaaattggtggcagctattcgatacaatgtgttacgaagcctgagttgaatgtt
gatctctttgttcggttgcctaaggagtgtttcctggaaaaagattatttgaattaccga
taccatgccaagaggtgcctttacctctgcataattaagaagtacatgaagcgtaaatca
tcagctttaagagttgaatggtccaccctacagaatgaggcacgaaaacctgttttgctt
gtctttccagctgagaagctcgaagttcctggattttttgtgaggataattcctacagca
ccatccctatttaatatttcaaagttgaacgtgaagcggaacaatgttcgtgctctgaat
caaggggatgttcttcaacctactccaatatataatagcagtattttggaagatatgttt
ttggaggagaatgcagaatttgtcaggaaaacctttcatggtttgagggagttgagagag
gctttgattttgctgaaggtctgggctcggcggagaagttctatacatgttcatgattgc
ttaaatggattcctaatctccatcattttggcataccttgcgactcatgataaaattaat
aattctctcaaggcagttcagatagttcgcattacattggatttcttagcaacttcaaag
ttatggagccgagggctttactttaaagagcaagggcaggactgctttccaaaggaggaa
aggatgcaatacaaggaaatatttccggttgtgatctgtgattcatcctcacatgtcaat
ttggcttatcgaatgactagtgctggtttcattgagctccaagacgaggctcatttggct
cttaagtgcattcagaaatgtatagatggaggatttgatgaactctttatgacaaaggtc
gactttcctgctaaatatgactactgcataagattgaagttgcaagggaatagtgaggta
tatgcttcaggattttgcttggatgacgaatgctggagattgtatgagcggaaagtatat
agccttctccgtcaagggctgactgatagagtaaatttcatacgtgtcgtgtggagaaac
actgcttcaggatgtggtattgaaaatgggttgtccacactagatagagagcaattgctt
attggaatttcagtgagctctgtagagaaagcttttagagttgttgatgttggcccaaat
gctgaaaataaggacgaggcactgaaattccggaagttttggggtgaaaaagctgagctt
cgaagatttaaagatggtacaattgcagaaagcacagtttgggaaactgagcagtggacc
agacatctcattttaaccagaattgttgaatgcatacttcaacgccatctttcactacca
aaagaaagaattgtgcaaatgaccgatcaacttgacttctctttacttaatggcgttaaa
gattctatgtcacattctggaggtttgcttggggcacttgaagttctatcaaagcgcctg
cgcctcattgaagatattccattgcgagtttctagtgtgcagcctttggattctgcattt
aggcttacatctgtcttccttccggaaccgcatcccctggttaatgaaaaggggaaccta
acaaggctgcgtacacagtgtccgtcttgcattcaaccacttgaagttatgattcagttg
gaaggatctgggaactggccaatggatgacatagcaatcaagaaaaccaaaacagctttc
ctccttaaaattggagagagtctggagcataagtggggcatgacatgtactgctaccgag
gatgatgttgatgtctttttctctggatatgcatttcgtcttaaaattttgcatgagaga
ggcttgagcctgttgaaaagggaagttggaagcaatcaattaaagcgggtaccatccaca
gacaagaaacttttcattagcggtcaacactccaacatgatcaacggactacagggccag
tatccaatatacgggcatgttgttaggttagcaaaaagatgggttgcttcacatctattt
tcggcatgcttggttgaggaggcagttgaattgttggttgcatatctctttctgaagcct
ttaccatttaatgctcctttctcacggatcactggatttttaaggttcctgcgtctacta
gcagattatgattggaccttttctgctatggtggttgacataaataatgatttgacccta
tatgataagaaagaaatcaatgacaactttgcgttaagtagaaaagtctatgaagaaaat
ccacaaaatgtgaacccagcaatgttcttggctacagcctatgacaaggaatcagaagct
tggaccagatgcgcgccaaactcactggatctgagaagattagttgcatatgctcgaagc
agtgcggatttgttgaccaaactcgtattgcaggatcagactgattcttacaggtgggag
tgtcttttccgaactcctttaaacaactatgatgcggtggttcttctccacagggacaga
ttgccttaccccaaacgtttactcttcccatctgaattaaaccaggggaagatgttggct
agagggaatgtttgcaagaatttccacccattcattttggctcaagatttgaaggggagc
tacaaggaactacaaaaccagctattggtgaactttgacccactgagatgctttattggg
gatctagagaaagagttcccgaacacatttaaactgtggtatgattttctgggaggtgat
gctattggcctaacttgggagaaacctcattcaaagaaacgggaacgagaggagacaaca
gaggataacaagaatccagttgaggccttaaaagctgttggtcggatagggaaaggcttt
gtgaggagcgtgtattttctcaaggcgccaaggctctcatag
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integrated database retrieval system
