Tripterygium wilfordii (thunder duke vine): 119998662
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Entry
119998662 CDS
T07256
Name
(RefSeq) vacuolar protein sorting-associated protein 53 A-like
KO
K20299
vacuolar protein sorting-associated protein 53
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
twl04131
]
119998662
Membrane trafficking [BR:
twl04131
]
Protein recycling
Others
EARP complex
119998662
Endosome - Golgi transport
Tethering complex
GARP complex
119998662
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps53_N
VPS53_C
RINT1_TIP1
COG4_N
Vps54_N
COG7
XhlA
RecG_N
COP9_hel_rpt
DUF401
PTHB1_hp
Ribosomal_L12_N
Motif
Other DBs
NCBI-GeneID:
119998662
NCBI-ProteinID:
XP_038701940
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Position
5:1513086..1534661
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AA seq
822 aa
AA seq
DB search
MDKSSALDYINHMFPTEESLSGVEPLMQKIHNEIRHVDARILAAVRQQSNSGTKAKEDLA
VATHAVEELMHKIREIKTKAEQSETMVQEICRDIKKLDFAKRHITTTITALHRLTMLVSA
VEQLQVMASKRQYKDAAAQLEAVNQLCSHFEAYRDVPKITDLREKFKNIKQILKSHVFSD
FSSLGTGKETEESNLLQQLSDACLVVDALEPSVREDLVNNFCNRELTSYEQIFEGAELAK
LDKTERRYSWIKRRIRTNEELWKIFPPSWHVPYGLCIQFCKKTRKQLEGILDNPQEKLDV
GKLLLALQRTLEFEDELAEKFGGGTQNREVVNEIEEIGRGEGDSRDASDIRKKYERKLAA
HQGTGIEEKDRNRDLSVPGAGFNFRGIISSCFEPHLTIYVELEERTLMEHLEKLVQEETW
DVEEGSQNNILSSSMQLFLMIKRILKRCSALTKNQTLYNLFKVFQRVLKAYATKLFARLP
KGGTGIMTAATGMDGQIKTSDKDERVICYIVNSAEYCHKTAGELAESVSKIIDRQLADGV
DMSEVQDEFSAVITKALVTLVHGLETKFDVEMAAMARVPWGTLESVGDQSEYVNGINMIL
TSSIPVLGRLLSPIYFQFFLDKLASSLGPRFYSNIFKCKQISETGAQQMLLDTQAVKTIL
LDIPSMGRQTSNAASYSKFVSREMSKAEALLKVILSPIDSVADTYRALLPEGTPMEFQRI
LELKGLKKADQQSILDDFIKHGPAITQLTIAPRVVPAAPAVPSPPAATNLASVGFIASRE
DVLARAAALGRGAATTGFKRFLALTEAAKDRKDGPFRKLFNA
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
atggacaagtcgagcgcattggactatatcaatcacatgttccccacagaggaatcttta
tctggtgtcgagccgctgatgcaaaaaatacataatgagattcgtcatgtggatgccaga
atattggctgctgtccgccagcagagtaattcgggaaccaaagccaaggaagatcttgct
gttgctacgcatgctgtagaggaactcatgcataagatccgtgaaataaaaaccaaagcg
gagcaaagtgaaacaatggttcaggagatatgccgtgacattaagaagttggactttgct
aaaagacatataacaactacgataaccgctcttcatcggcttacaatgctagtctctgct
gttgagcagcttcaagtaatggcctcaaaaagacaatataaggatgcagctgcacagcta
gaggctgtaaaccaattatgtagccattttgaagcctacagggatgtaccgaagatcaca
gatctgagggagaaatttaagaatatcaaacaaatactcaagtcacacgtattttctgat
ttctcaagcttaggtacgggaaaagagacagaagagtctaacctactgcagcagttgtct
gatgcttgcttagttgttgatgccttggagccatctgtgagggaagatttggtgaataat
ttttgcaacagggagcttacttcatatgagcagatcttcgagggagctgagctggctaag
ttggataaaactgaaaggagatattcatggatcaagcgtagaatcagaacaaatgaagaa
ctttggaaaatcttccctccatcttggcatgttccatatgggctttgtatccagttctgt
aaaaagacaaggaaacagctggaggggatacttgataatccgcaagagaagctggatgtt
ggaaaattattattggcattacagagaaccctagaatttgaggatgaattggctgaaaag
tttggcggaggcacccagaatagagaggttgttaatgaaattgaagaaattggaagaggg
gaaggcgacagtcgagatgcatcagatatccgaaagaaatatgaaagaaagcttgctgca
catcaaggaactgggattgaagaaaaggatagaaatagggatttgtcagtgcctggagct
gggtttaacttccgtggaatcatttcatcctgctttgaacctcatttgactatatatgtt
gaactagaagagagaacactaatggaacatctggagaaacttgttcaggaggaaacatgg
gatgttgaggagggaagtcagaataatattttatctagtagtatgcagttgtttcttatg
atcaagaggatcttaaagcggtgcagtgctctaacaaagaaccagacgttgtataatctg
tttaaggtattccaaagagttcttaaagcatatgcaacaaagttatttgcaagactaccc
aagggtggcactggtatcatgacagctgcaactggcatggatggacagataaagacatct
gataaggatgaaagggtgatttgctacattgtgaattcggctgagtattgccataaaacg
gcaggagaactagcggaaagtgtatccaaaataattgaccgccagttggcagatggtgtg
gatatgtcagaagttcaggatgaattttctgcggttataacaaaagcattggtgacgctg
gtccatggcctagaaactaaatttgatgttgaaatggctgctatggcacgcgttccttgg
ggaaccctggagagtgttggtgatcaatcagagtatgttaatggcataaacatgatcctt
actagtagcatccctgtgctaggacgacttctttctcctatttacttccagttctttctg
gacaagcttgcatcatctctcggcccccgcttctactcaaacatcttcaaatgcaagcag
atctcagaaactggtgcacaacagatgcttttggatacccaagctgttaaaacaattctt
ctggatattccatccatgggtcgacagacatcaaatgctgctagctattcaaagtttgtt
agccgtgagatgagcaaagcagaagctcttttgaaggtcatactgtccccaattgattca
gtggctgatacatatcgagcattgctgccagagggaacaccaatggagtttcagcgtatc
ctggagctcaagggcctcaagaaagcagaccagcaatccatactggacgacttcatcaaa
catggacctgcaatcacacaacttacaattgcaccaagagttgttccagctgcccctgcc
gtcccttcacctcctgcagctacgaatcttgcttcagttggatttattgcttcgcgagag
gatgtgctggccagagcagcagcactgggacgtggagcagccactacaggtttcaagagg
ttccttgctttaactgaagctgcaaaagaccggaaggatggacctttcaggaaacttttc
aacgcatga
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