Tripterygium wilfordii (thunder duke vine): 119998716
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Entry
119998716 CDS
T07256
Name
(RefSeq) apoptotic chromatin condensation inducer in the nucleus-like
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl03013
Nucleocytoplasmic transport
twl03015
mRNA surveillance pathway
twl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119998716
09122 Translation
03013 Nucleocytoplasmic transport
119998716
03015 mRNA surveillance pathway
119998716
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
twl03019
]
119998716
03041 Spliceosome [BR:
twl03041
]
119998716
Messenger RNA biogenesis [BR:
twl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
119998716
Spliceosome [BR:
twl03041
]
Complex C
Other components
EJC/TREX
119998716
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSB_motif
SAP
Motif
Other DBs
NCBI-GeneID:
119998716
NCBI-ProteinID:
XP_038702019
LinkDB
All DBs
Position
5:972501..977679
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AA seq
715 aa
AA seq
DB search
MSSQYPILENRPIDQWKVTELKEELKRRKLTTRGLKDDLIKRLAEALRIERENAVKEVDD
LDPKPVVDVKNPEIVSVVTETVKDPVDNVNVQVEVNDGAPTVVQGIVREGSATASIESSR
VEEGKLLDHASGVETSNLVTQTVATEVALNGQDMQKFATHGDNGNISTQLENEDPKPQYE
YPKPQLENEDPKPRLENEDPKPQLENEDPKPQLENEDPKPLLENEDPKPSLENEGLKPPP
EDPMLHSSAPNYQVSEVSPILGSPVKSDSISTDSVSINEKIELKDNIIDDNVKLEIDVVK
PEMVGPSSSNLVAAGGESHPMDVEESHEKQASVEQKDDNDAVNEDMIRKNDSADVGYSEK
LNLDRSSGDDSMEDDAIETKQIDSKYNDDELGDKSVKNELSVKEESIVDVVGDDLSADKK
DILAEGRIHPAMPAEKRKLNDQEVGGNTEPLKRQRRWKSESLKVPEIQGSNLTPSTTPKD
TFQSPGLKRNFSRSDSVSEDAPKERAVPPSPKPPTNSLRIDRFLRPFTLKAVQELLGKTG
QVTDFWMDHIKTHCYVTYSSVEEAVETRNAVYNLKWPSNGGRLLMAEFVDPQEVKIRVET
PQGPPQTAAVPVNTASTAPPAATTPQPSPSSRQQVSRQQLPPPPPILPPPPPLSNPSPVR
ERLTIPQPSEKVDPPIVTLDDLFRKTKATPWIYYLPLSEEQVAAKLGARSRAPKQ
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcgcaatacccgattcttgaaaatcgtccaatcgatcaatggaaggtcacagag
ctgaaggaagagcttaagagacgtaaactgactacccggggtttgaaagacgatttgata
aaacgtttggccgaagcacttcgcattgagagggaaaatgctgtgaaggaagttgatgat
ttggatcccaaacctgtggttgatgtgaaaaatccagaaatagtgtcagttgttactgaa
acagttaaggatcctgtggacaatgttaatgttcaggttgaggtcaatgatggtgctcca
actgtggttcaaggaattgtccgagaagggagcgcaacagctagtattgaatcttctagg
gtggaagaagggaagcttcttgatcatgcatctggggtggaaactagcaatctagttact
caaactgttgctactgaagtagcattgaatgggcaagatatgcaaaaatttgctactcat
ggggataatgggaatattagtactcagctggagaatgaagatcccaagccccagtatgaa
tatccaaagccccagctggagaacgaggatccaaagccccgactggagaacgaggatccg
aagccccagctggagaacgaggatccgaagccccagctggagaatgaggatccgaagccc
ctgctggagaatgaggatccgaagcccagcctggagaatgagggtttaaagcctcctcct
gaggatccaatgcttcattcttctgctccgaactatcaggtatctgaggtcagccctatt
ttggggtctccagtaaaatctgattctatttctactgattctgtgtcaattaatgaaaaa
attgaactaaaggataatataattgatgataatgttaaactagaaatagatgttgttaag
cctgagatggtgggaccatcatccagcaatcttgttgccgctggtggcgaatcacatcca
atggatgtggaagagtcacatgagaagcaggcatctgttgaacagaaagatgacaacgat
gctgtaaatgaagacatgatcagaaaaaatgatagtgctgatgtagggtactcggaaaag
ttaaatttggacagaagttcaggtgatgactctatggaggatgatgcaatagaaactaag
caaattgattcaaagtataatgatgatgagttgggggataagagtgtgaaaaatgaattg
tctgttaaggaggaaagtattgttgatgttgtgggagatgacttatctgcagacaaaaaa
gatatccttgctgagggtaggattcatcctgccatgcctgctgagaaaaggaaacttaat
gaccaagaagtaggtgggaacaccgagccgctgaagaggcaacgtagatggaaatctgag
agccttaaagttcctgaaatccaagggtcgaatctgacgccctccaccacccctaaggac
acatttcagtctcctggtcttaagcgcaatttctctagatctgactctgttagcgaggat
gctcccaaggaacgtgctgttccgccatcaccaaaacctccgacaaattctctcagaatt
gatcgttttctgcgaccttttaccctcaaagctgtccaagagctactgggtaaaactggg
caagttacagatttctggatggaccacattaagacccattgttatgttacttattcttca
gtggaagaagctgtggagacacggaatgctgtttataacctaaaatggccttctaatggt
ggacgccttctaatggctgagtttgttgaccctcaggaagtgaaaattcgagtggagact
cctcaaggtcctccacaaaccgcagctgtgcctgtcaatactgcttctactgctcctcct
gctgcaactacgccacagccatcaccgtcctcccgtcaacaggtttctaggcagcagctt
cctcctcccccacctatcctcccccctcctccaccactttctaacccatctccagttaga
gagcggctcaccattcctcaaccatcagagaaagttgatccaccgattgtcactttagat
gatctcttcaggaaaacgaaagctaccccgtggatttactatctaccgctgtcagaagaa
caagttgctgcaaaacttggagcacgcagcagagcccccaaacagtag
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