Tripterygium wilfordii (thunder duke vine): 119998764
Help
Entry
119998764 CDS
T07256
Name
(RefSeq) transcription elongation factor SPT6 homolog isoform X1
KO
K11292
transcription elongation factor SPT6
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
twl03021
]
119998764
03036 Chromosome and associated proteins [BR:
twl03036
]
119998764
Transcription machinery [BR:
twl03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
119998764
Chromosome and associated proteins [BR:
twl03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
119998764
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
HHH_7
YqgF
SPT6_acidic
Spt6_S1
HHH_9
Tex_central_region
HTH_44
HHH_3
SH2
OB_PDCD11
S1_RRP5
S1
Motif
Other DBs
NCBI-GeneID:
119998764
NCBI-ProteinID:
XP_038702097
LinkDB
All DBs
Position
5:complement(11883174..11892350)
Genome browser
AA seq
1625 aa
AA seq
DB search
MGRNVVSDEDERDEVGLEDEDVDREPLDAEELDNRDDDEEEEEEEDGQDFYEKDGFIVDD
EEEEDQDEEEERASSDEERQKKKKKRKKKESEDVLDEDDYELLRDNNAFYPRMKESKKFK
RLKKAQRDEEGSGFSDEEFDGSGKGGRTDEEKLKRRLFGDEEGAPLEDIAEEEEQAEEEE
DADIGEEDEMADFIVDEEEVDENGAPVRRKKLRRKKNRQAPGVSSSALQEAHEIFGDVDE
LLQLRKQGLESSEWKERRLEDEFEPIVLSEKYMTEKDEQIRVTDIPERMQIFEESTGPPL
MDETSLLEESSWIENQLNQLPSIVPPLPVDDKRPSVNRDDIIRFLELVHVQKLDIPFIAM
YRKEECLSLLRDPRQHEDDGENQDKSGLTPTVKWHKLLWAIHDLDRKWLLLQKRKNALHS
YYNKRFEEESRRIYDETRLNLNQQLFESILKSLKAAESEREVDDVDLKFNLHFPPGEVGA
DEGQYKRPKRKSQYSICSKAGLWEVASKFGHSAEQFGRELFYVELNDELEDAKETPEEMA
SNFTCAMFETPQAVLKGARHMAAVEISCEPSVRKWFRGFFMERAVVSTSPTPDGKLAIDS
FHQFAGLKWLREKPLSAFKDAQWLLIQKAEEEKLLQVTFKLSDETLSALKEEFDGHYLSR
GVSKSAQVWNEQRRLILHDAIYSFLIPSMEKEVRSLLTSKAKSWLLLEYGNALWNIVSVG
PYQRKENDLSDDEAAPRVMACSWGPGKPATTFVMLDSSGEVLDVLHAASLSLRPQNVNDQ
QRKKQDQQRVLKFMTDHQPHVVVLGAVNLSCTRLKDDIYEIIFKMVEENPRDLGHEMDEL
SIIYGDESLPRLYENSRVSSDQLPGQPGIVKRAVALGRYLQNPLAMAATLCGPGREILSW
KLDPLENFLTSDEKYGMVEQVMVDATNQVGLDVNLAMSHEWLFASLQFVSGLGPRKAASL
QRSLVRAGAIFTRKDFVTTHGLGKKVFVNAVGFLRVRRSGLAASSSQFIDLLDDTRIHPE
SYGVAQELAKDVYDEDINGDTNDDEDALEMAIEHVRDRPNLLKSLNIDAYLESKNRENKR
ETFDDIRRELMQGFRDFRKPYKEPSQDEEFYMISGETEDTLAEGMIVQATVRKVLSQKVI
CALENGLTGMLLRENVADDWRDNVELSDRLHEGDILTCRISSVVKNRYQVFLSCKESDMR
NNRHQHIRDLDPYYHEDQSSVRSEQEKARKEKELAKKHFKPRMIVHPRFQNITADEAVQL
LSDKDPGESIIRPSSRGPSYLTLTLKVYDGVYAHKDIVEGGKEHKDITSLLRIGKTLKIG
EDTFEDLDEVMDRYVDPLVGYLKAMLSYRKFRRGTKAEVDELLRIEKSEYPMRILYAFGI
SQEHPGTFILTYIRSTNPHHEYVGLYPKGFKFRKRMFEDIDRLVAYFQRHIDDPLHESAP
SIRSVAAMVPMRSPASGASAGSGWGGSTNEGGWRGHSFDRDRSSTPGSRTGRNDYRNGGG
RDVHPSGLPRPYSGRGRGRASHNSSRGNSGSNERQDNSYDTTSKWDSDSKDENDGWNKFP
GAKVQNSPGREAFPGGWGTGGSGGGGGGSSRGATGGGEKGSGGGGSWDAAGEKGSSGNNT
GWGTR
NT seq
4878 nt
NT seq
+upstream
nt +downstream
nt
atgggcagaaacgttgtctccgatgaagatgaaagagatgaggtcgggcttgaagatgag
gacgtggacagggaacctttggacgccgaagaactcgataatcgggatgacgatgaagag
gaggaagaggaagaagatgggcaagatttttatgagaaggatggcttcatagttgatgac
gaggaagaagaggatcaagacgaagaagaagagagggcaagcagcgacgaggagagacag
aaaaagaagaagaaaaggaagaaaaaagaatcggaggatgtcctcgatgaagatgactat
gagctgcttcgggataacaatgcgttttatccacgtatgaaggagagcaaaaaatttaaa
agattgaagaaagctcagagggatgaggaaggatctggattttctgatgaagagtttgac
ggaagtggtaaaggtggaaggactgatgaggagaagcttaagcgcagattatttggtgat
gaggaaggtgcaccactggaggatatcgctgaagaggaggagcaagcagaagaagaggag
gatgcagacattggtgaggaggacgaaatggctgattttattgttgatgaggaagaagtt
gatgagaatggagctcctgtgagacggaaaaagttgaggagaaagaaaaatagacaagca
ccgggtgtttcatcatctgctttgcaggaagctcatgagatatttggcgatgttgatgaa
ctcttgcaacttcgaaaacagggtctagagtccagtgaatggaaggaaaggagacttgaa
gatgaattcgaaccaattgtcctttctgaaaagtacatgactgaaaaggatgagcagatc
cgggtgactgatattccagaaagaatgcagatatttgaggaaagcactggtcctccttta
atggatgaaactagtctgttagaggagagcagctggatagagaatcagctgaatcaactt
ccaagcattgttccacccttacctgttgatgataaaaggccgtctgtaaacagagatgac
attataagatttttggagctagtgcatgtgcagaagctagatattccttttatagcaatg
taccggaaggaggaatgccttagcttgttgagagatcctaggcaacatgaagatgatggt
gagaatcaggataaatctgggttaacacccacagtaaaatggcataagttactttgggca
attcacgacctcgacagaaagtggttgcttcttcaaaaacgaaagaatgcacttcattca
tattataataagcgatttgaagaagaatctcgccggatatatgatgaaacaagactcaac
ttaaatcagcagctttttgaatcaattctcaagtcgctcaaagctgcagaatcagaaaga
gaggttgatgacgtggatttgaaatttaacctgcattttcctcctggtgaagttggtgcg
gatgaagggcagtataaaaggccgaaaaggaaatcacaatacagcatctgcagcaaggct
gggctatgggaggttgccagcaagtttggccacagtgcggagcaatttggacgagagtta
ttttatgtggagctgaatgatgaattggaagatgctaaggaaaccccggaggagatggca
tcaaacttcacttgtgcaatgtttgaaacacctcaagccgtcctcaagggggccaggcac
atggctgcggtggagataagttgcgaaccatctgtcaggaaatggttccgcggcttcttt
atggagagggctgttgtatctacaagtccaactcctgacgggaagttggctatagattct
ttccatcagtttgctggacttaagtggttgcgcgaaaagccattgagcgcatttaaggat
gcacaatggctgcttattcagaaggctgaagaggagaagctgcttcaagtcactttcaag
ctgtcagatgaaactcttagtgcattgaaagaagagtttgatgggcattatcttagtcgc
ggtgttagtaaatctgctcaagtttggaatgagcaaaggaggttgatattgcacgatgca
atatatagtttccttataccttcgatggagaaagaagtacgatctctgttgactagtaag
gctaaaagctggttacttttagagtacggtaatgcgttgtggaatatagtctctgtgggg
ccatatcaaagaaaggaaaatgatctttcagatgatgaagctgcaccaagggtgatggct
tgctcttggggccccggaaagccagcaactacttttgtcatgcttgattcatcaggagag
gtgctagatgtgttgcatgcagcgtctctctctttacggcctcaaaatgttaatgaccag
caaaggaagaaacaagatcaacaacgcgttttgaagttcatgacagatcatcaacctcat
gttgtggttctgggagctgtgaatttgtcttgtacacggctcaaggacgacatttatgag
atcatttttaagatggttgaggaaaatcctagagatcttggtcatgagatggatgagctg
agcatcatatatggggatgaatctctgcctcgcctttatgaaaattctcgtgtctcatct
gaccagttgcctggacagccaggcattgtcaagcgagctgttgctcttggtcgatacctt
caaaatccactggcaatggctgcaacactttgtggaccagggagagagattttatcttgg
aaacttgatcctttagagaactttctcacttctgatgagaagtatggaatggtggaacaa
gtgatggtagatgctaccaaccaagtgggccttgacgtcaacttggctatgagccatgag
tggttatttgcatctttgcaatttgtatctgggcttgggcctagaaaggcagcatccttg
cagaggtctctggtaagagctggggctatattcacacgaaaagactttgtaacaacccat
ggacttggtaaaaaagtgtttgtcaatgcagttggttttttgcgtgtccggcggagtggg
ctggctgctagcagcagccagttcattgatttattggatgatacgagaatccatcctgaa
tcttatggggtggcgcaggagttagcgaaagatgtttatgatgaagatatcaatggggat
acaaatgatgatgaagatgcacttgagatggcaatagagcatgttagagaccggcctaac
ttattgaaaagcctcaacattgatgcctatctggagagcaaaaatcgtgagaacaagaga
gagacatttgatgatattagaagggagttgatgcaaggttttcgggatttccgtaaacct
tataaagaaccaagtcaagatgaggaattctacatgatttctggtgaaactgaggatacg
ctggctgaaggtatgattgtgcaggctacagtccgcaaggtgctaagtcagaaggttata
tgtgcgcttgaaaatggattgactggaatgcttttgagggaaaatgttgctgatgattgg
agggataatgttgagttgtctgataggctacatgaaggggacatactgacttgcaggatt
tcatcagttgtgaaaaacagatatcaggtctttctgtcttgtaaagagagtgatatgaga
aacaaccgtcaccagcacattcgagaccttgacccctactatcatgaagaccagagcagt
gtgcgaagtgagcaggagaaagctcgtaaagagaaggagcttgccaagaaacattttaaa
ccaagaatgattgttcatccccgtttccagaatataaccgctgacgaagcagtgcagtta
ttgtctgacaaggatcctggtgaaagtattatacgccccagttctcgtggaccttcgtat
ttaactctaacactaaaagtgtatgatggagtttatgctcacaaagacatagttgaaggt
ggaaaagaacacaaggacattacaagcttgcttcgcattgggaagacactgaaaattggg
gaggatacttttgaggacttggatgaggtaatggatcgatacgtggatcccttggtgggt
tatttaaaggctatgttaagttatcgcaagttcaggaggggcactaaagcagaagtggat
gagcttttgaggattgagaaatcagaatatccaatgcggatattatatgctttcggcatt
tcccaagagcacccaggcacattcattctaacttatatacgtagtacaaatccgcaccat
gagtatgttggtctctatccaaagggattcaaatttcggaaaaggatgtttgaagacatt
gatcggcttgtggcatatttccaaaggcatattgatgatcccttacatgagtcggcaccg
tctatcagatcagttgctgctatggtgccaatgcgaagccctgcatctggggcatctgca
ggtagtggctggggtggttccaccaatgaaggtggttggagagggcattcgtttgatcga
gatcgatcttctactccaggttcaagaacaggtcggaatgattacagaaatggtggtggg
cgagatgtgcatccaagcgggttacctaggccatatagtgggcgtggacgtggtcgagcc
tcgcataacagtagcagaggaaacagtggcagcaatgagaggcaggataatagctatgac
actacttctaaatgggattcagacagcaaggatgaaaatgatggatggaacaaattccca
ggtgccaaggttcaaaactctcctggcagagaagctttcccaggtggctggggcactggt
ggtagtggtggcggtggtggtggcagcagtcggggtgctactggtggtggtgaaaaggga
agtggtggtggcggcagttgggatgctgctggtgaaaagggtagcagtggcaacaatact
ggctgggggacaaggtaa
DBGET
integrated database retrieval system
