Tripterygium wilfordii (thunder duke vine): 119998767
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Entry
119998767 CDS
T07256
Name
(RefSeq) E3 ubiquitin-protein ligase HAKAI homolog isoform X1
KO
K15685
E3 ubiquitin-protein ligase Hakai [EC:
2.3.2.27
]
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
twl03019
]
119998767
04131 Membrane trafficking [BR:
twl04131
]
119998767
04121 Ubiquitin system [BR:
twl04121
]
119998767
Enzymes [BR:
twl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119998767
Messenger RNA biogenesis [BR:
twl03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
119998767
Membrane trafficking [BR:
twl04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
119998767
Ubiquitin system [BR:
twl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
119998767
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_3
zf-RING_UBOX
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
119998767
NCBI-ProteinID:
XP_038702105
LinkDB
All DBs
Position
5:complement(9408519..9412209)
Genome browser
AA seq
494 aa
AA seq
DB search
MLQIRLNRALSTDSGGGLKPLPVDTVTVACPDHLVIADLPVAKGIGAATSATVVKTLGRR
SRRQLGERVHFCVRCDFPIAVYGRLSPCDHAFCLDCARSDSICYLCDERIQKIQTIKMME
GIVICAAPHCLKSFLKRTEFESHIQESHANLLQPNADKEDGNESEAQSAKQQTPSESLAR
GPARSVISPASNSQIHDREDKSRRQQPREQMPPRPLMPSQQPFPGQVQNFPSEAHLDSNR
PPGFDLPGPHNPFQQSFETQGTPQQESGQFSDKQQGILSETLYPGYPSMHAIQPPNFGIP
MNSNPLLSTPFGVPPFMAEGGQPFYGTPYDMGHIARPDTAAERGSEPGSLVGFPPGAAGG
VNFSANYSQPWAAVPAVMPFESVPGSQGMADGFTNMSDAQRKFAFYQGDYGRNPGSLPMV
PPPPPVNRPMEAMQAGNSMDPRDGKGILAPQPLPHQARAPPPLPHLSQHKNKYHSGDMDR
EGPGFDWQHENRES
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgcttcagattcgactaaacagagcgctgtccacggacagtggcggaggcttgaaaccc
ttgcctgtggatactgtgacagttgcgtgcccggatcacctggttattgctgaccttcca
gtggcaaaaggcattggtgctgcaacttctgctaccgttgtcaagactctgggtcgcagg
tcccgtcgccaactcggtgaacgggttcacttctgtgtccgatgtgatttccctattgct
gtttatggacgtttgagcccttgtgaccatgccttctgtctcgattgtgcaaggagcgac
tcaatttgctatctatgtgatgagcgtattcaaaagatccagacaataaaaatgatggag
ggaattgtcatctgtgctgcccctcactgtctcaagtcatttttaaagaggactgaattt
gaatctcatattcaggagagccatgctaaccttctacagcccaatgcagataaagaagat
ggtaatgaatcagaggctcagagtgcaaaacaacaaacaccttctgaatcccttgctcgg
ggtcctgcaaggtcagttatctctccagcttcaaattctcagatccatgatcgtgaagac
aaatctcgtcggcagcagcctagggaacaaatgcctccaaggccgttgatgccatcacag
caaccttttcctggccaagttcaaaattttccatcagaggcccatcttgatagtaaccgg
ccccctggcttcgacctccctggtccgcacaaccccttccaacaaagctttgagacacaa
ggaacgccacagcaagaatctgggcagttttcggataagcagcaagggattttatctgag
accctctatcctggatacccatcaatgcatgcaattcagccaccaaattttggtatccca
atgaattcaaatccacttctgagtaccccatttggtgttcctccttttatggctgaggga
ggtcagccgttctatggtactccctatgatatgggccatattgctaggccagatacagca
gcagaaagaggatctgaaccaggttctttagttgggttcccaccgggtgcagcagggggt
gtgaatttttcggcaaattactctcaaccctgggctgctgtaccagctgtcatgcctttt
gaatctgtaccgggaagtcaaggaatggctgatggttttacaaacatgtcggatgcccaa
agaaaatttgcattttatcaaggtgattatggacggaatccaggaagtttacctatggtt
cctcccccacctcctgtcaacaggccgatggaagctatgcaagctggtaattccatggat
cccagagatggcaagggtattttggcaccacaacccttgccacaccaagcacgagctcca
ccgcctctcccacatttgtcacagcataagaacaaataccattctggtgatatggatcgt
gaaggacctggctttgattggcagcatgagaaccgtgaatcgtga
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