Tripterygium wilfordii (thunder duke vine): 119999119
Help
Entry
119999119 CDS
T07256
Name
(RefSeq) probable pectate lyase 4
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl00040
Pentose and glucuronate interconversions
twl01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
119999119
Enzymes [BR:
twl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
119999119
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
119999119
NCBI-ProteinID:
XP_038702566
LinkDB
All DBs
Position
5:complement(8462806..8466269)
Genome browser
AA seq
374 aa
AA seq
DB search
MGNAHAHRKNRNGRNGPYPSETSAPPFKYGPSGDSVQRPSSTQMVPSLPYSHVDSSLRAL
AAQAEGFGRFAVGGLHGPLYHVTTLADDGPGSLREGCRKKEPLWIVFEVSGIIHLHSYLS
VSSYKTIDGRGQRIKLTGKGLRLKECEHVIICNLEFEGGRGPDVDGIQIKPKSKHIWIDR
CSLRDYDDGLIDITRESTDITISRCHFSQHDKTILIGADPSHTSDRCIRVTIHHCFFDGT
RQRHPRVRFGKVHLYNNYTRNWGIYAVCASVEAQIYSQCNIYEAGQKKVAFKYLREKAAD
KEAEGNGYIRSEGDLFASGTQAGLMTESEHSMFHPSEHYSTWTVEAPTDALRHVLQCCTG
WQTLVRPNDHTPTA
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atggggaacgcacacgctcaccggaagaatcgtaacggccggaacggcccttacccctcc
gaaacgtctgctccgccttttaaatatggaccgtctggtgactccgtacaacgcccaagc
tccacccagatggtgccctccttaccttactctcacgttgactccagcttgcgagccctc
gccgcccaagctgagggctttggtcgctttgctgtcggtggcctccacggtcccctctac
catgtcaccaccttagcagatgatgggccaggatcactaagggaaggatgtcgcaaaaaa
gaaccgctctggattgtctttgaagtgtcgggtatcattcatctccattcttacttgagt
gtctcgtcttataaaaccattgatggccggggacagagaataaaactcacagggaaaggt
ttgaggctaaaagaatgcgaacatgtaattatatgcaatctggagtttgaaggtggtaga
gggcctgatgtggatggcattcaaataaaacccaaatcaaagcacatatggatagaccgc
tgcagcctccgtgattatgacgatgggcttatagatatcacccgagagagcacagatatt
accatctctaggtgtcacttctctcagcatgacaagacgatacttattggagcagaccca
tctcacactagcgacaggtgcatcagggtgaccattcaccattgtttttttgatggcaca
cgacaaaggcatcctcgtgttagatttgggaaagttcatctttacaacaattacaccagg
aactggggcatttatgccgtttgtgccagtgtagaagctcagatatactcccagtgcaat
atatatgaagctggacagaagaaggtagcattcaagtacctcagagaaaaggcagctgac
aaggaggcggaagggaatggctacataagatctgaaggagacttgtttgcatctggaact
caagcaggattaatgaccgagagtgaacatagcatgtttcatcctagtgagcactactct
acatggacggtggaagctccaacagatgctctccggcatgtgcttcagtgttgtacagga
tggcaaactttagtaaggccaaatgaccatacaccaactgcgtaa
DBGET
integrated database retrieval system
