Tripterygium wilfordii (thunder duke vine): 119999538
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Entry
119999538 CDS
T07256
Name
(RefSeq) probable rhamnogalacturonate lyase B isoform X1
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
119999538
Enzymes [BR:
twl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
119999538
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Gene cluster
GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
EMC7_beta-sandw
CarbopepD_reg_2
Motif
Other DBs
NCBI-GeneID:
119999538
NCBI-ProteinID:
XP_038703085
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Position
6:9071173..9078036
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AA seq
714 aa
AA seq
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MTGGGLHRIIGCFGDCSGTTTQTHGDVNDNLHCGGLVRRENDSLTMPPARVQLHSLDRHV
VMDNGILQVTLSKPEGIVTGVQYGSINNVLEVLNNESNRGYWDLHWTPPGGKGIFDVIKG
TDFRVIVHTEEQAELSFTRMWDPSQEWKYIPLNIDKRFVMLRGSSGFYSYAIYEHLKEWP
GFDLGETRITFKLRKDKFQYMAIADNRQRFMPLPDDRLAGRCQALAYQEAVLLVNPKAQE
LKGEVDDKYQYSCENKDIQVHGWISFNPPVGFWQITPSNEFRTGGPLKQNLTSHVGSTTL
AMFHSSHYAGKDLVPRFEAHEPWKKVFGPVFIYLNSASSGADPHWLWEDAKIQMMAEVQS
WPYCFPASEDFPKVEDRGSICGRLLVRDSYVGKDYILANGAYVGLAPPGEVGSWQRECKG
ILRDHLSDHIVNVQNLMEIVLAMNQDYQFWTRSDENGYFFIKHVRAGNYNLYAWVPGFIG
DYRGDFGVTITSGCDIDMGDLVYEPPRDGPTLWEIGIPDRSAAEFYVPDPDPKYINKLFV
NHPDRFRQYGLWDRYADIYPDEDLVYTVGVSNYSKDWFFAQVVRKKGDNLVGTSWQIKFK
LENADRNATYKLRVALASATLAELQVRVNDPNTKRPLFSSGLIGRDNSIARLGIHGLYWL
YNVNIPGTQLVEGENTIFLTQPRCTSPFQGIMYDYIRLEEPPRSNSMQDPSCSS
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgacaggaggaggattgcacagaatcataggctgttttggcgactgctccggaaccacc
actcaaactcatggggatgtaaatgacaatcttcattgtggtggactagttcgaagagaa
aacgatagccttaccatgccacctgccagggtccaactgcacagtcttgatcgtcatgtg
gtgatggacaatggcatacttcaagtcacgttgtcaaaaccggagggtattgtcactgga
gtacaatatggtagcattaacaacgtgcttgaagttcttaacaacgaatctaacagaggg
tactgggatcttcactggactccacctggtggaaaaggaatattcgatgtgatcaaagga
acagattttagggttatagttcatactgaggagcaggctgagctgtcctttaccagaatg
tgggatccctcccaagagtggaagtacattcctctgaatatagataaaaggtttgtaatg
cttcgtggttcctcgggtttctactcatatgccatttatgagcacttgaaggagtggcct
ggatttgatcttggtgaaacgaggataactttcaaacttagaaaggacaagtttcagtac
atggccattgcagataataggcaaagattcatgcccctgcctgatgaccggttagcggga
agatgccaagccctagcctatcaggaagctgtcctacttgtcaatcccaaggcacaagag
ctcaaaggagaggtggatgacaagtaccaatattcgtgtgagaacaaagatatccaggtc
catgggtggatatctttcaatcctccagtgggattctggcaaataacacccagcaatgag
ttccgaactggtgggcccctgaaacagaacttaacatcacacgttggttctaccaccctt
gcaatgtttcatagttcacattatgcgggaaaagatcttgtgccaagatttgaagctcat
gagccgtggaagaaagtttttggccctgttttcatctatcttaattctgcatcaagtgga
gctgatcctcactggttatgggaggacgcaaaaatacagatgatggctgaagtgcaaagc
tggccatattgttttcctgcttcagaggatttccccaaggtagaagatcgggggagtata
tgtggtagactactagtccgagatagttatgtcggcaaggactatattttggcaaatggt
gcttatgttggtttggcgccaccaggagaggttggatcatggcaaagagaatgcaagggt
attttaagggatcacctaagtgatcatattgttaatgttcaaaaccttatggaaattgtg
cttgctatgaatcaggactaccaattctggaccaggtcagatgaaaatggctatttcttt
ataaagcatgtacgagctggtaactataatctttatgcatgggtccctggttttattgga
gattaccgtggtgattttggcgttaccataacgtcaggctgtgatattgatatgggtgat
cttgtatacgagcctccaagagatggacccacactatgggagataggcatccctgatcgc
tctgctgcagagttttatgtccctgaccctgacccgaagtatatcaataaactttttgtt
aatcatcctgacaggtttcggcaatatggtttgtgggacagatatgcagatatatatcct
gatgaggatttggtttacacggttggtgttagcaactatagcaaagattggttttttgct
caggttgtcaggaagaaaggtgataacctcgtaggaactagctggcaaattaaattcaaa
cttgagaatgcagatcgcaatgctacctacaaactgcgagtggctcttgcatctgcaact
ctggcagaattacaggttagagttaatgatccaaacacaaaacgccctctgttttcaagc
ggactgatagggagggacaattcgattgcaagactcgggattcacgggctctactggctg
tataatgtgaatataccaggcactcaacttgttgaaggggagaacaccatcttcctcacg
caaccaagatgcaccagcccttttcaaggtattatgtatgactatattcgtctggaagag
cctccccgttcgaattccatgcaggatccttcctgttcatcttag
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