Tripterygium wilfordii (thunder duke vine): 119999582
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Entry
119999582 CDS
T07256
Name
(RefSeq) bromodomain and WD repeat-containing protein 3 isoform X1
KO
K11797
PH-interacting protein
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
twl04121
]
119999582
Ubiquitin system [BR:
twl04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
119999582
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_WDR75_1st
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_SCAP
WDR55
Beta-prop_TEP1_C
WD40_MABP1-WDR62_2nd
Beta-prop_IFT122_1st
Beta-prop_WDR90_POC16_2nd
Bromodomain
NBCH_WD40
Beta-prop_RIG_2nd
Beta-prop_DCAF4
WD40_MABP1-WDR62_1st
Beta-prop_EIPR1
Beta-prop_HPS5
Beta-prop_WDR35_TULP_N
Agenet
WD_LRWD1
Auxin_resp
Motif
Other DBs
NCBI-GeneID:
119999582
NCBI-ProteinID:
XP_038703171
LinkDB
All DBs
Position
6:497155..513327
Genome browser
AA seq
1691 aa
AA seq
DB search
MDFLKFKSSGGASLCNASSNFSNTMLEKNHFEQPGRISHHAVETDVDVDLREVYFLIMHF
LSSGPCQRTFGQLFDELLAHQLLPRRYHACYSSNSVGNENDDGDGISLPLSYSKLVERYS
HIEKDHLVKLLKQLIMFTASPGHGKVGDSAPNAADVPTLLGSDSFSLLNCDRRVENKRVK
PLPAYMRWPHMQADQVRGLSLREIGGGFTKHRRAPSIRSACYAIAKPSTMFQRMQNMKKL
RGHRDSVYCAIFDRTGRYVITGSDDRLVKIWSMETAYCLTSCRGHEGDITDLAVSSNNLL
VASASNDFVIRVWRIPDGAQISVLRGHTGSVTAIAFSPRPTSVYQLLSSSDDGTCRIWDV
RSSQCSPLIYLPNPSAAIGKSNGSSIHGSLFSNGLQSHQILCCAYNANGTFFVTGSSDTY
ARVWSACKLNVEDSEQPIHELDLLSGHENDVNYVQFSGCAVPTRSSTSDIVKENIPKFKN
SWFCHDNIVTCSRDGSAIIWIPRSRRSHGKIGRWVRAYHLRVPPPPLPPQPLRGGPRQRL
LPTPRGVNMIIWSLDNHFVLAAIMDCRICVWNAVDGSLVHSLTGHTQSSYVLDVHPFNPR
IAMSAGYDGKTIVWDIWEGSPIRTYEVGPYKLVDGKFSPDGTSIVLSDEVGQIYLLNTGQ
GESQKDAKYDQFFLGDYRPLIRDSSGNVLDQETQLPPHRRNIQDPLCDSSLIPYPEPYQT
MYQNRRLGALGLEWHPSSINLVVGQDISLGQDYLMPPLEDLDRIFEPLPQFIEPMYWEPE
NEAVSDDPDSEYNVAEECFSEGERDSLGSHYSSEPERSADDSDPVAGNKDGLRKSRRRNH
ATGMEMTSGGCVRKRNSDEYDGSLSGSNRVKKSKSWRKASKRKSSTKSLRPQRVAARNAL
SMFSKMNERSTDGDDVDDSEDDSSDSDLVLQDSGSWKLDRNFEHLKDTRKDQPSLVGSED
IVRTSEVSELQLNSGSRKRLVVKFTRPKKPVPSEEGRPISGKEADSTNPSFQEHTEEHMV
GISSKYAELSSSNGMDDQPCQNHKGVYTAEGRHPDRAEDCAVECAGEKGKKIGWREVRIC
TSKSSLLEGGMPSDAYTENFDTQKESSRDVNRDDKQFGSDALQEATVVEIRKPSPDTESS
PLIDCKQKADTSTTSPLIDHKLKGKADASTASGTENLKENALPKLKFIIKTKSTSHDSRS
LSNVITAVDEQHNDRRYDVMSGSHSCMVHDHTLTESEKGSGRSSFQHSLQADSKLKIGNV
VQEKEKAHVARTDPLGFYGIIGEETSSLAHYHHSGTDLSEASSDILRRTRSMTMKATSQG
PNSNCSFKMREMHGFVGSSKNEGRFSKKACDQQWVSGSKGAVRLRSSRNKQGDPGILTGK
ESESNHAIRKLSWLMLSKQEGGYSYIPQLGDEVAYLRQGHQGCIRMIGLPDVGPWTKGNV
RAVEICKVKKLSYATLPGSGDCCCKITLKFVDPSSDFFGQTFELTLPDLISSPDFVVEKT
WFDDSCSRNWANGDKCWVWWRSNENGEGGSWWEGKIISSSAMSDKFPNSPWERYCVQYEG
DDEFHLHCPWELHDSVIPLDHAHIDFGNRDKLLDLFAKLEQSVTRHQDCYGFQKLNDAAQ
KVDFLNRFAVPLYPEIIELRLKNNYYRRVEALKQDIAVMLSNAELYFAKSAQLSAKVKHL
KDWFTRKLSRF
NT seq
5076 nt
NT seq
+upstream
nt +downstream
nt
atggatttcttgaagtttaaatcttcaggtggtgcttctctttgtaacgcatcttcaaat
ttcagtaatacaatgcttgagaagaaccattttgaacaaccggggagaattagtcatcac
gctgttgagactgatgtggatgtagatcttagagaagtgtactttttgattatgcatttt
ctatcttctggtccttgtcagaggacttttgggcaactctttgatgaacttctggcacat
cagcttctgcctagacgatatcatgcttgctattcaagtaacagtgtcggcaatgaaaat
gatgacggtgatgggatctctctcccgttgagttacagtaaattggtggaaaggtattct
catattgagaaggatcatttggtgaagcttctaaagcaattgataatgtttacagcctct
cctgggcatggcaaggttggagacagtgctccaaatgcagctgatgttcctacattgctg
ggatctgattccttttcgcttctgaattgtgataggagggtggagaataagcgagttaag
cctctacctgcatacatgcggtggcctcatatgcaggccgatcaagtgcgtgggctttct
ttgagagaaattggaggtggttttacgaagcatcgtcgtgcaccatctattcgttctgca
tgttatgccattgctaaaccgtcgacgatgttccaaaggatgcagaatatgaagaaatta
cgagggcaccgagattccgtctattgtgctatatttgatcgcacagggagatatgtaatt
actggttcagatgatcgtcttgttaagatttggtcaatggaaacggcttactgcttaacc
agttgtcgtggacatgaaggtgacattactgacttggccgttagttctaacaatcttttg
gtggcttctgcttcaaatgattttgtcattcgagtttggcgaataccagatggagcacaa
atttcggttttacgtgggcatactggatctgttactgccattgcgtttagtcccaggcct
acctctgtctaccagcttttatcgtcatcagatgatggaacttgtcgaatctgggatgta
aggtcttcccaatgcagtccactcatttacctaccaaaccctagcgctgctattggtaag
agcaatggctcatctatccatggatccttattcagtaatggtttacagagccaccaaatt
ctctgctgtgcttataatgccaatggaactttttttgtcaccggaagctctgacacgtat
gcaagagtctggagtgcttgtaaacttaatgttgaggactcggaacaacccattcatgag
ttagatttactatctggccatgaaaatgatgtcaattatgtgcaatttagcggttgtgca
gtgcccacaagatcatcaacttctgacattgtgaaggagaacattccaaagttcaaaaat
tcctggttctgtcatgacaacatagttacctgttctcgtgatggtagtgcaataatctgg
attccaagatcacgtagatcccatggaaaaattggacgctgggtacgtgcttatcatcta
agagttccacctccaccgttgcctcctcaacctcttcgaggagggccgcgccagagatta
cttccaacacctcggggtgtcaatatgatcatatggagcctggataatcattttgttctt
gcagctataatggattgcagaatatgcgtttggaatgctgttgatggtagcttagttcat
tccctgactggtcacactcaatcttcttatgttttagatgttcatcctttcaatcctcgg
atagccatgagtgctggctatgatgggaaaaccatagtttgggatatatgggagggctct
cctatcaggacatatgaagttgggccctacaagttggttgatgggaagttttctccggat
gggacatcgattgtactttctgatgaggtagggcagatatatttactcaacacaggtcag
ggtgagtctcaaaaggatgccaagtatgatcagttctttctcggggattatcgccccctt
atcagagacagttcaggaaatgttcttgatcaggagacacaacttcctcctcatcgaagg
aacatccaagatcctctttgtgattcaagtctaattccttatccggaaccttatcaaacc
atgtaccagaatcgtcgacttggtgccttgggtcttgagtggcatccttcatctataaat
cttgttgttggccaagatatcagtttaggccaagattatctaatgcctcctttggaggat
ttggatagaatttttgagccactaccacagtttatagaacccatgtactgggaaccagaa
aatgaagctgtgagtgatgaccctgattcggagtacaatgttgcggaggaatgtttcagt
gaaggcgagcgagatagtttgggttcccactattctagtgaacctgaacgtagtgcagat
gacagtgatccagtggcaggtaataaagatggtcttcgcaagtcaagaagaagaaatcat
gccactggaatggagatgacttcaggaggatgtgtcagaaagagaaattctgatgaatat
gatggctctttatctggaagcaacagagttaagaaatcaaaaagttggcggaaagcttcc
aagaggaagtcctccacaaaatccttgagaccacaacgagttgccgctcgcaatgctcta
agtatgttctcaaaaatgaatgaaaggtctacggatggggatgatgtagatgattctgaa
gatgattcttcagacagtgacttggtgctgcaagattcagggagctggaaattggataga
aacttcgagcatctgaaggatacacgcaaagatcaaccatcattggttggttctgaagat
atagtaaggacttctgaagtttctgagttgcaattaaattctggaagcaggaagagatta
gttgttaagtttactcgtcctaaaaagcccgtcccttcagaagaaggcagaccaattagt
ggcaaagaggctgattctacgaacccgtcttttcaagaacatacagaagagcacatggtt
ggtataagctcaaaatatgcagagttatcttcctcaaatggcatggatgatcagccatgc
cagaatcacaaaggtgtttacactgcagaaggtaggcatcctgatagggctgaggactgt
gcggttgaatgtgcaggtgagaaagggaaaaaaatcggatggagagaggttaggatttgc
acctcaaaaagctcactattggaaggtggcatgccatctgatgcatacactgaaaatttt
gatacccagaaggaaagctcaagagacgtgaatagggatgataagcaatttggaagtgat
gcattgcaggaagcaactgttgtggaaatcagaaagccttctcctgatactgagtcgtca
cctctgattgactgtaaacagaaagctgatacttccacaacctcacctctaattgaccac
aaactgaaagggaaagctgatgcttccacagcctccggtactgaaaatctcaaagagaac
gctctacctaagttaaaatttataataaaaacgaaaagtacttcacatgactctagaagt
ctttctaatgtaataactgcagtagatgagcagcacaatgataggaggtatgatgtaatg
tctggaagtcactcatgcatggtgcatgatcatactctgacagaatcagagaaaggttct
ggtagatcaagttttcagcattcacttcaagcagattcaaagttgaagatcggcaatgtt
gttcaggaaaaggaaaaggcacatgtggctagaactgatccattaggtttttacggtatt
attggagaagagacttcaagtttggcacactaccatcactcaggaactgatttatccgaa
gcatcaagtgacatattacgtaggacaagatccatgacaatgaaggcaacttcgcaaggg
ccaaattccaactgtagttttaagatgcgagaaatgcatggattcgtgggatcgtcaaag
aatgaagggcggttctccaaaaaagcatgtgatcaacaatgggtatctggttcaaaagga
gcagttaggttaaggtcttctagaaacaagcagggtgacccaggcattttgactggaaag
gagtcggagtcaaatcacgccatcagaaaattatcatggctgatgttgtcaaagcaggag
gggggttactcttatatccctcagcttggtgatgaagttgcatatttaagacagggacat
caaggttgtattagaatgattggcttaccagatgtaggcccttggactaagggtaacgta
cgtgcggttgagatctgcaaggttaaaaagctttcttatgccactcttcctggttctggg
gactgttgctgtaaaataacattgaaatttgttgatccttcatctgatttttttggtcaa
acattcgagttgaccctacctgacctcatcagttctcctgattttgtcgtggagaaaaca
tggtttgatgattcctgcagtagaaattgggccaatggggataaatgctgggtgtggtgg
agatcgaatgagaatggggaaggcggtagttggtgggaaggcaaaattatctcttcatcg
gctatgtctgataaatttcctaatagtccatgggaaagatattgtgttcaatatgaggga
gatgatgagttccatctccactgtccctgggaacttcatgactctgtcattccattggat
catgcacatatagattttggaaaccgagacaagctgctggatctatttgctaaattggag
cagtcagtgactagacaccaggattgttatggtttccaaaaattgaatgacgctgctcaa
aaggtggattttctcaacaggtttgctgtccctctatatcctgaaataatcgagttgagg
ttaaagaataattactaccggagagttgaagctctgaaacaggatatagctgtgatgctg
tcaaatgccgaattatattttgccaagagtgctcagttatctgcgaaagtgaagcaccta
aaagattggtttacgaggaaactgtcaagattttga
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integrated database retrieval system
