Tripterygium wilfordii (thunder duke vine): 119999850
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Entry
119999850 CDS
T07256
Name
(RefSeq) DNA polymerase lambda
KO
K03512
DNA polymerase lambda [EC:
2.7.7.7
4.2.99.-]
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl03410
Base excision repair
twl03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
119999850
03450 Non-homologous end-joining
119999850
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
twl03400
]
119999850
Enzymes [BR:
twl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
119999850
DNA repair and recombination proteins [BR:
twl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
119999850
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
119999850
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B_palm
DNA_pol_lambd_f
DNA_pol_B_thumb
HHH_8
NTP_transf_2
Cdd1
BRCT
HHH_5
IMS_HHH_1
IMS_HHH
PTCB-BRCT
Motif
Other DBs
NCBI-GeneID:
119999850
NCBI-ProteinID:
XP_038703546
LinkDB
All DBs
Position
6:complement(7196466..7211412)
Genome browser
AA seq
536 aa
AA seq
DB search
MAPKATRKKAPSTDPDGIFAGIFAFLTDKRVQPRRLQIWKQKLLQMGATIEEALNKRVTH
VFAMNLDVLLEEVGRERLARFKGSVLLYQWLEDCLRLGEKVSEDPYHLEVDAEGENIADK
SLTSHSTNRISSSDDEPSPSKKIRSSSDDSKNLKGEQNSGNDSLREESNSKGDHRSSFHT
QDPANNSLKPYDTPNKNSSLPYSPPDLNRNITDIFGKLINIYRALGDDRRSFSYHKAIPV
IEKLPFKIESVDQVKHLPSIGKSMQDHIREIVMTGKLSKLEHFEEDEKVRTISLFGEVWG
IGPATAAKLYEKGHRTLDDLKKDDSLTNSQKIGLKYFDDINSRIPRHEVQEMEKLLEKVA
EEILPGVVIVCGGSYRRGKASCGDMDIITTHPDGKSHKGFLAKFVKCLKDMKFLREDLIF
STHSEEGTNSGVDTYFGLCTYPGRELRHRIDFKVYPRDIYAFGLIAWTGNDVLNRRLRIL
ADSKGYRLDDTGLFPATQGSSGKKGARGSASLRFETEKEVFDFLGFPWLEPHERNL
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atggcgccaaaggcaaccagaaagaaagctccctctaccgatcccgatggcatttttgcc
ggaatcttcgctttcttgactgataagagagtacagcctcgtcgattacagatttggaag
cagaagctgctgcaaatgggtgctaccattgaggaggctctaaacaaaagggtaactcac
gtgtttgcaatgaacttagatgtgcttctcgaagaagtaggcagagaacgcctggcacgc
ttcaaaggaagtgttctactctatcaatggctagaagattgcttgaggttaggagaaaag
gtatccgaagatccatatcatctggaagtggatgcagaaggggagaatattgcagacaag
tcattgacttctcattcaaccaatagaatcagttctagtgatgatgagccatcaccttcc
aaaaagataagatcgtcctcagatgattcgaagaatttgaaaggagaacaaaattctgga
aatgattctttacgtgaggaatcaaattctaaaggggaccatcgtagctctttccatact
caagaccctgcgaacaatagtttgaagccctatgatactccaaacaagaattcatccttg
ccatacagtccaccagatttaaacaggaatatcactgatatatttgggaaacttataaat
atttacagagcattgggcgatgatcggaggtcatttagctatcacaaagctattccagtt
attgagaagttgccatttaaaatcgaaagtgtggaccaggtcaaacatctgccatctatt
ggaaaatcaatgcaggaccatattcgggagatagtcatgactgggaagttgtccaagtta
gagcacttcgaggaggatgaaaaggtgcgaacaatttcgttatttggggaagtctggggt
atcggtccagccacagctgcaaaattatatgagaaagggcatcgtacattagatgatcta
aagaaagatgactcattaacaaattcacagaagataggattaaagtactttgatgatatt
aattcaaggattccacgccatgaggttcaagaaatggaaaaactcctagagaaagttgcc
gaagaaattttgcctggggtggttattgtatgtggagggtcctataggcgtggaaaagct
tcctgcggggatatggacattataacaacacatcctgatggaaaaagtcataaaggtttt
ctggcaaaatttgtgaagtgtttaaaggatatgaaatttttaagagaggatttgattttc
agtacccatagtgaggagggtaccaattcaggtgtggacacatactttggtctttgtacg
tatccaggacgggagctacgccatcgcatagatttcaaggtatatccaagggacatatat
gcttttggactcatagcatggactggcaatgacgtattaaatagaaggttgagaatactg
gcagactccaaaggataccggcttgatgacacagggttgtttccagctactcaagggtct
agcgggaaaaagggtgcaagaggtagtgcaagtctaagatttgagacggagaaggaggtg
tttgatttcctgggatttccttggcttgagccacatgagaggaatttgtga
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