Tripterygium wilfordii (thunder duke vine): 119999874
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Entry
119999874 CDS
T07256
Name
(RefSeq) sm-like protein LSM8
KO
K12627
U6 snRNA-associated Sm-like protein LSm8
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl03018
RNA degradation
twl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119999874
09123 Folding, sorting and degradation
03018 RNA degradation
119999874
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
twl03019
]
119999874
03041 Spliceosome [BR:
twl03041
]
119999874
Messenger RNA biogenesis [BR:
twl03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
119999874
mRNA degradation factors
5'-3' decay
Lsm complex
119999874
Spliceosome [BR:
twl03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
119999874
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
DUF150_C
Motif
Other DBs
NCBI-GeneID:
119999874
NCBI-ProteinID:
XP_038703581
LinkDB
All DBs
Position
6:complement(12733261..12735680)
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AA seq
97 aa
AA seq
DB search
MSGAGLESLVDQTISVITNDGRNIVGILKGFDQATNIILDESHERVYSTKEGVQLLVLGL
YIIRGDNISIVGELDEELDSLLDLSSLRAHPLKPVIH
NT seq
294 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggcgcaggacttgagtctctcgtggatcagacaatttcagttatcacaaatgat
ggtcgtaatatagtgggaatcttaaaaggctttgatcaggccacaaatatcattcttgat
gaatctcatgaacgtgtttactcgactaaggaaggcgttcagctgctcgtgttgggtttg
tatataataaggggtgacaacataagtattgtaggggaacttgatgaagaacttgattct
cttctcgacttgtccagtctgagagctcatcccctcaagcctgttattcattga
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