Tripterygium wilfordii (thunder duke vine): 119999975
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Entry
119999975 CDS
T07256
Name
(RefSeq) SWI/SNF complex component SNF12 homolog
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
119999975
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
twl03021
]
119999975
03036 Chromosome and associated proteins [BR:
twl03036
]
119999975
Transcription machinery [BR:
twl03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
119999975
Chromosome and associated proteins [BR:
twl03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
119999975
PBAF complex
119999975
GBAF(ncBAF) complex
119999975
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
YEATS
Motif
Other DBs
NCBI-GeneID:
119999975
NCBI-ProteinID:
XP_038703756
LinkDB
All DBs
Position
6:complement(10597913..10600978)
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AA seq
540 aa
AA seq
DB search
MSVNNNNPPKSLVGSSLPFGNVGMPPNPTFSQPQSQSQIGAGFQGQFQLSQAQALAQAHS
RAAAHAQAQAQVQAAHAQFQAHLQAQGLSQSAGIGNLGASSPSFLTPGNANANVKRGLPL
KPPARPGVPMTNTVSPLRTMELTPAARRKKLKLPEKQLQERVAAILPESALYTQLLEFEA
RVDAAMARKKIDIQEALKNPPCIQKTLRIYVFNNFANQIKTIPQKPNAEPPSWTLKIIGR
ILEEGVDPDQPGVVQKPNPLYPKFSSFFKRVTISLDQRLYPDNNMIIWENARSPAPHEGF
EVKRKGDKEFTVSIQLEMNYAPGKFKLSPALMEVLGIEVDTRTRIIAAIWHYVKARKLQN
PNDPAFFNCDPPLQRVFGEEKMKFTMVSQKISHHLFSPQPIHLEHAIKLSGSNPAGTACY
DVLVDVPFPIQRELSALLANAEKSKEIDTCDEAICSSIRKIHEHRRRRAFFLGFSQSPVE
FIDALIESQRRDLKIVAGEASRSAEKEHQSDIFNQPWVEDAVIRYLNRKPAVGSDAPGST
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtgaataataataacccaccaaagagccttgtggggtcgtctttgcccttcggt
aatgttgggatgccaccaaacccaacattctcccagccccaatctcaatcacagatcggg
gctggatttcagggtcagttccagctgtcccaagcccaggcccttgcccaggcacattca
agagcagcagctcatgctcaggctcaagctcaagttcaagctgctcacgcccaattccaa
gcacacttacaagcacagggtctttctcagagtgctggcatcggaaacttgggtgcttct
tcgccctcatttttgactccgggcaatgctaatgcaaatgtaaagaggggattgccactg
aaacctccggcacgtcctggtgttcctatgacaaacacggtttcacctttgagaacaatg
gagcttacacctgctgctcgaagaaaaaagctgaagcttccagagaaacagttacaggaa
agagtggcagccatcctgcctgagtctgcactatatacacagctgcttgagtttgaggct
cgtgttgatgctgccatggccaggaagaagattgacatccaggaggccctaaagaaccct
ccttgcatacaaaaaaccctccggatttatgttttcaataattttgctaaccagattaaa
acaattccccagaagccaaatgctgagccaccttcttggaccctcaagataattggaagg
attttggaagaaggggtagatcctgatcagcctggggtagttcagaaaccaaatcccttg
tacccaaagttctcatctttcttcaagagagtgaccatttccctggatcagagattatat
ccggataacaatatgatcatatgggagaatgctcgatcccctgctccacacgagggtttt
gaggtgaagagaaaaggggataaggaatttactgtgagcattcagttagaaatgaattat
gcccctgggaaatttaagctttctccagctttgatggaagttctcggcattgaggttgat
acccgaacaagaataattgctgcaatttggcactatgtcaaggctaggaaactgcagaat
ccaaatgaccctgctttctttaattgtgatcctcctcttcagagagtatttggggaagag
aaaatgaaattcactatggtttctcagaagatttcacatcatttgttttctccacagcca
atacatttagagcatgcgattaagctttcggggagtaatccagcaggaactgcctgctat
gatgtgttggttgatgtgcccttcccaatacaaagggaattgtctgcattgttggcgaat
gcagagaagagtaaagagatagatacatgtgatgaagcaatatgcagttctataaggaaa
atccatgagcaccggaggagacgcgcattctttcttggatttagtcaatcacctgtggaa
tttattgatgcactcattgaatctcaaagaagagatttgaagattgtggctggagaagct
agtcggagtgctgagaaagagcaccaatctgatatcttcaatcaaccatgggttgaagat
gctgtcattcgttatttgaatcgcaagccagctgtggggagcgatgcccctggaagcaca
tga
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