Tripterygium wilfordii (thunder duke vine): 120000011
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Entry
120000011 CDS
T07256
Name
(RefSeq) SWI/SNF complex subunit SWI3B isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
120000011
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
twl03021
]
120000011
03036 Chromosome and associated proteins [BR:
twl03036
]
120000011
Transcription machinery [BR:
twl03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
120000011
Chromosome and associated proteins [BR:
twl03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
120000011
PBAF complex
120000011
GBAF(ncBAF) complex
120000011
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM
Myb_DNA-binding
SWIRM-assoc_1
Myb_DNA-bind_6
Drc1-Sld2
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
120000011
NCBI-ProteinID:
XP_038703803
LinkDB
All DBs
Position
6:complement(12606928..12611005)
Genome browser
AA seq
494 aa
AA seq
DB search
MAMPSKSPINVPPPQGSYAPTVPHPPVKPEISSTSTTGVTNPRPPPPPPSSDADVIHVPS
YSRWFSWNATHECEVRFLPEFFDSRSPSKNPRVYRYYRNSIIKLFRENPARKLTFTEARK
TLVGDVGSIRRIFDFLEAWGLINYSPSALNKPLRWEEKETKGQSSGAAGDVGVASFDSSS
QVNRESTKRLCSGCKSVCSIACFACDKYDLTLCARCYVRGNYRVGVNSSDFRRVEISEET
KADWTEKDTLLLLEAVVHFGDDWRRVAHHVGGRSEKDCVNHFIKLPFGEEFSGYLDSGKM
DNKCHQMKDQRTAESGLESIGVSSPSKRMRLTPLADASNPIMAQAAFLSALAGVEVAEAA
ARAALTAASGTDSKTGVGVPGILARNTRQQEADIASNGDTSPTTMGGASVEAKSMLEKEE
QDLERAISGIVEVEMKEIQDKIVRFEELDLQMEKERQQLEQMKNQLFADKLSLLFPTSSS
PNAGEVLVDSLRTD
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atggccatgccctcgaagtcacccatcaatgtcccacctccacagggatcctacgccccc
accgtgccacatcctccggttaaacccgaaatttcctccacctctactaccggtgtgacc
aatcctcgtccaccgccaccacctccctcctccgacgctgacgtcattcacgtccccagc
tactcccggtggttttcatggaacgccacacatgaatgtgaggtacggttcctcccggag
ttcttcgattcgcggtcgccttcaaagaaccctagggtttacaggtattaccggaactcc
ataatcaagctcttcagggagaatcctgccaggaagcttacattcaccgaggccaggaag
acgctggttggggatgtaggatcaattcgtaggatttttgatttcttggaggcatggggt
ttgataaattactctccttcggctttgaacaagccattgagatgggaggagaaggagact
aaggggcaaagcagtggggccgctggtgatgtaggagtcgcttcctttgattcttcttcc
caggtgaacagggagagtaccaagaggctgtgtagtggatgcaagtccgtatgcagcatt
gcttgctttgcttgtgataagtatgacttaactctgtgtgcacggtgctatgtacgtggc
aactatcgtgttggtgtcaattcttcagatttcaggcgtgttgagatcagtgaagaaact
aaggcagattggacggaaaaagacaccttattactgctggaagccgttgtgcattttggt
gatgactggagaagagttgcgcatcacgttggtggtagaagtgagaaagactgtgtcaat
cattttattaagcttccatttggggaggaattttctggttacttagactcagggaagatg
gataacaagtgtcaccaaatgaaggaccaacgtaccgctgaatctggattggaaagtatt
ggtgtatcatctccaagtaagagaatgcgtcttacaccacttgcagatgctagcaaccca
ataatggcccaggctgcttttctgtcagctttggcgggtgtagaggttgctgaagctgct
gctcgagcagctttgaccgctgcgtctggaacagactctaaaactggtgtaggggtccct
ggtatactggccaggaacactagacagcaagaagccgatattgcatctaacggggacaca
tctccaactacgatggggggagctagtgtagaagcaaaatcaatgcttgagaaggaagag
caagatctggagagagcaatttcaggaattgtagaagtggagatgaaagagattcaagat
aagattgttcgttttgaggagttggatttgcagatggaaaaagaaaggcaacaactagag
caaatgaagaaccagctctttgctgataaacttagccttttatttcccacaagttcttcc
ccaaatgctggagaagtattggtggatagtttaagaacagattaa
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