Tripterygium wilfordii (thunder duke vine): 120000098
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Entry
120000098 CDS
T07256
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 13
KO
K14805
ATP-dependent RNA helicase DDX24/MAK5 [EC:
5.6.2.7
]
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
twl03009
]
120000098
Enzymes [BR:
twl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
120000098
Ribosome biogenesis [BR:
twl03009
]
Eukaryotic type
Pre-60S particles
Helicases
120000098
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Helicase_C_2
AAA_22
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
120000098
NCBI-ProteinID:
XP_038704298
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Position
1:2609302..2618560
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AA seq
808 aa
AA seq
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MAADSPPPAPVSSSKPSKRKSSKKRKRGLGDAEVDPFDKLPWNSSLPTDEDGAFSLVIGS
NELEGGFLSLEEISEADYGLEIPKPLKEKPEKAKKLKTQKPRDSEENIFVKDEVEVDVDA
VGEKKTKKKKKKKKKKKSKKAKETQTQKVEELLSGSSGREQVEEGLVNEDEFYAWNELRL
HPLLMKSIYRLGFKEPTPIQTTCIPAAAHQGKDVVGAAETGSGKTLAFGLPILQRLLEER
EKAVKMFETKGEKEEAERFAPKGFLRALVITPTRELAVQVTDHLKAAANGLNVRVVSIVG
GMSTEKQERLLRESPEIIVGTPGRLWELMSGGEKHLVELHSLSFFVLDEADRMIENGHFH
ELQSIIDLLPGTNSSFEGQPQNSQNCQTVSSTQRKKRQTFVFSATIALSTDFRKKLKRGF
LKSKQSTTDGLNSIETLSERVGMRANAAIIDLTNASILADKLEESFIECREEDKDAYLYY
ILSVHGQGRTIVFCTSIAALRHISSILRTLGINVWTLHAQMQQQARLKAIDRFRANEHGT
LVATDVAARGLDIPGVRTVIHYQLPHSAEVYIHRSGRTARASADGCSIALIASNETSKFA
SLCKSFSKESLRRFPLEESYMPEVMKRLSLARQIDKITRKNSQEKAKKSWLERNAESVGL
IVENYDSEEERVNSLKQKKASSVQLKNLQQELNTQLSRPLQPKTFSHRYLAGAGVSPLLQ
RQIEELARPKHNDMDTGEKKRRKMVVIGQDCVEPLQALQNAGSELRFDLKETAEKRRNVE
HLRRKRKDEKTRLRDQKRNRKKLKGSSE
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
atggctgctgattcgccaccaccagcaccagtttcttctagtaaaccgtcgaagaggaaa
agctccaagaagcgaaagcgtggcttaggagacgctgaagtagacccgttcgacaagctc
ccgtggaattcttctctccccaccgacgaagatggtgctttctctctcgtcattggttcc
aacgaacttgaaggaggtttcctttcgcttgaggagataagtgaggctgattatggattg
gaaattcctaaacccctgaaggaaaagccagaaaaagcaaagaaattgaagacgcagaaa
cccagggattcagaagaaaacatttttgttaaagatgaagtagaagtggacgtggatgca
gtaggtgagaaaaaaacgaagaagaagaagaagaagaaaaagaaaaagaagagtaagaag
gcaaaggaaactcaaacccaaaaagttgaggaattgctgtctggtagcagtggaagggaa
caagttgaggaagggttggtaaatgaagatgagttttatgcgtggaacgagttgaggctt
catcctctccttatgaaatcaatatacagacttgggtttaaggagccaactccaattcag
acaacttgtattcctgctgcagctcatcaagggaaggatgttgtgggtgctgcggaaaca
gggtctgggaagacacttgcttttggtttacccattttgcagcgtctcttagaagaacga
gaaaaagctgtcaaaatgtttgaaacaaagggggagaaggaggaggcagaaaggtttgct
ccaaaaggctttttacgagctcttgttatcactcctacaagggagcttgcagttcaggtt
actgatcatcttaaggcagcagccaatggtctcaatgttagagttgtttctattgttggt
gggatgtcaacggagaagcaggaaagactgctacgagagagtcctgagattattgttgga
actccagggaggttatgggagcttatgtcaggaggagaaaagcatcttgttgagcttcat
tcattgtctttctttgtgctggatgaagctgatcggatgattgaaaatggacattttcat
gagttgcagtcaattattgacttgcttcctgggactaatagctcttttgaaggacagcct
caaaattctcaaaactgccagacagtttctagcacacaaagaaagaaaagacaaacattt
gttttttctgctacaatagcactatcgaccgactttcggaagaagctaaaacgtggtttc
ctgaaatcgaagcaatcaacgactgatggcctgaattccatagagactctctctgaacgt
gttgggatgagagctaatgctgccatcatagatttgactaatgcatcaatactggctgat
aagcttgaggaatcttttattgaatgtagagaagaagacaaagatgcctatttgtattat
atattgagtgttcatggacaaggccgcaccattgtattttgtacatcaattgctgctcta
cgccatatttcctccatcttgcgcactcttggtatcaatgtttggacacttcatgctcag
atgcagcagcaagctcgtttaaaggcaattgatcgcttccgtgcaaatgaacatggtaca
ctcgtggctactgatgttgctgcaagaggtcttgatattcctggtgttcgaactgttatt
cactatcaacttccacattcagcggaagtttatatccatagaagtggaagaactgctaga
gcttctgctgatggatgcagcattgctctaattgcatcaaatgagacatcaaaatttgcc
tctttgtgcaaatcattttcaaaggaaagtttacggcgttttcctttggaggagtcatac
atgccggaggttatgaaacgactatcgcttgcacgtcaaatagacaaaatcacgcgaaag
aactcccaggagaaagcaaagaaaagctggttagaaagaaacgctgaatcagtggggttg
attgtggagaactatgatagtgaggaggaaagagtgaacagtttaaagcagaaaaaagcc
agctccgtgcaactaaagaacttgcaacaggagctcaacacgcaactttcccgtcctttg
cagccaaagacattctcacatcgctatttggctggggctggtgtttcgccgctccttcag
cgacaaattgaagaattagctagaccgaaacataatgacatggatacaggagaaaagaaa
agaaggaaaatggtggtaattggtcaggattgtgttgagccactccaggcacttcagaat
gctggttcggagctgcgctttgatctgaaagagacggcagaaaaacgaaggaatgtggag
catttgagaagaaaaaggaaagatgagaaaacacgattgcgtgaccagaagaggaaccgg
aaaaaattaaaaggaagcagtgagtag
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