Tripterygium wilfordii (thunder duke vine): 120000099
Help
Entry
120000099 CDS
T07256
Name
(RefSeq) paired amphipathic helix protein Sin3-like 2 isoform X1
KO
K11644
paired amphipathic helix protein Sin3a
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
twl03036
]
120000099
Chromosome and associated proteins [BR:
twl03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
120000099
REST complex
120000099
Heterochromatin formation proteins
Other heterochromatin formation proteins
120000099
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAH
Sin3a_C
Sin3_corepress
PAH_ZNF598
SPCC191_01
Motif
Other DBs
NCBI-GeneID:
120000099
NCBI-ProteinID:
XP_038703900
LinkDB
All DBs
Position
6:complement(9963800..9976572)
Genome browser
AA seq
1389 aa
AA seq
DB search
MKRMRDDVHAGSQFKRPFGSSLGESSYGQPQIPGGGGGIGGGDPSQKLTTNDALTYLKEV
KDMFQDQREKYDMFLEVMKDFKAQRTDTTGVIARVKELFKGHNNLIFGFNTFLPRGYEIT
LDEDGAPPKKTVEFEEAISFVNKIKKHFQSDDHVYKSFLDILNMYRKEHKDIGDVYNEVA
ALFEDHPDFLEEFRRFLPDSSATHMSHIPYGRSSIQFYNDRSFATPSLRHAHMDKHRRRD
RIITSHADRDLSVDHPELDEDKAMLKVHKEQNKRAERESRDWRNYDQDDREAETNRDLEH
IADRKKSARKVDSYGANSNLPSFDERDTSKNMYSQAFIFCEKVKERLHSLDDYQAFLRCL
SIYSKGIIKRNDLLNLVTDLLGKYPDLMEEFNDFLEHCENLDGFLAGVMSKKSLCTDGHV
SRSLKADEKDKEHKRELESAKEKDRGREKYLAKSIQELDLSNCERCTPSYRLLPVDYPIA
MASQRSGLGAQVLNDHWVSVTSGSEDYSFKHMRRNQYEESLFRCEDDRFELDMLLESVSS
TAKRAEELLNKMNENYPNLDSPIRMEDYFTALNLRCIERLYGDHGLDAMDILRKNPTLAL
PVILTRLKQKQEEWARCRSDFNKVWADIYAKNHYKSLDHRSFYFKQQDSKNLNGKSLVTE
IKELKEKLQKEDDVILAFAAGNKQHLVPHFEYEYSDVSIHEELYKLVQYSCKEVCSTKEQ
LNKVMRFWTTFLLPMLGVPSWPYVSASSADVGKANDTATNVTASSIEEGDGSPALDAMTN
SSIKPATHVDGCSLLGLAKCSSMRLANGDTMAKEESMICVNRVWKSDVTSDNQQLGRQEK
NTDMTDRISGYSIQIASVQVAGDSSAPLTENSHRRTSAEVTAGRVVIPSPHSDDDIEDHK
LKARTDIASSSKGEDAAKPILPPNGVPTNSTKVNRYHEDAAGPAKIEKEEGELSPIGDFE
EDNFAVYENTDVQVMPKGKDLNGSRQQKSGKEEGLCCQDTGGNDADADDEDSENASEAGD
DVSSSESADDECSREEIGEEEDVEHDEIDGKGESEGEAEGMADTQFLGGGDSSSLPSERF
LLSVKPVAKHIPSGLVNEERKDSRVLYGNDDFYILFRLHQTLYERILSAKKNSTGVEMKW
RNSKDADSPDPYARFMSVLYNLLDGSADNAKFEDECRAIIGNQSYVLFTLDKLIYKLVKQ
LQTVATDEMGYKLLQLCEYEKSRQPGKMIDSVYYENARSLLQEENIFRFECSSAPSRLSI
QLMDNATEKPEALAVSMDPDFGAYLYNDFLPVFPGKKEPHGIIMRRNMRKYVGLDEYSAI
CMATEGATIFNGLECKIACSSYKISYVLDTEDFFFRLKRKRRNVSRDGSFYHDQSQSRVQ
RFVKFLSAS
NT seq
4170 nt
NT seq
+upstream
nt +downstream
nt
atgaagagaatgagagatgatgttcacgccgggtctcaatttaagcggccgtttggctct
tctctaggagaatcaagctatggccaacctcaaattccagggggaggaggaggaataggt
ggaggtgacccttctcagaaactcactactaatgatgctctaacatatctaaaggaagta
aaggacatgtttcaagaccagagggaaaagtatgacatgtttttggaggtgatgaaagat
ttcaaggctcaaagaaccgatactactggtgtgattgctagagtgaaggaattattcaag
ggtcataacaacctaatttttgggtttaacactttcttgccaagggggtatgaaataacc
cttgatgaagatggggctccaccaaagaaaactgttgagtttgaggaagccatcagcttt
gttaataagataaagaaacatttccaaagtgacgaccatgtttacaaatcattcctagac
attttaaatatgtatcggaaggagcacaaggacataggtgatgtctacaatgaggttgct
gctctgtttgaggaccatccagatttccttgaagagtttaggagattcttacctgattct
tctgcgacacatatgagtcatattccatatggtcgaagttctatccagttctacaatgac
cggagctttgctacaccctcattgcgccacgcgcatatggacaagcatcgtcggcgggac
aggattattacttcccatgctgaccgtgatcttagtgttgatcaccctgagctggacgag
gacaaagcaatgttgaaagtgcacaaagagcagaataagcgtgctgaaagagagagtagg
gactggagaaattatgatcaggatgatagagaagccgagaccaatagggacttggaacac
attgctgacagaaagaaatctgcccggaaggttgacagttatggagcaaattcaaacttg
ccttcttttgatgaaagagatacttcaaagaatatgtacagccaggcattcatattctgt
gagaaagttaaggagaggttacacagtttagatgactaccaagcattcctgagatgcctc
agtatttatagcaaaggaattattaaaaggaatgatctgctaaatttggtgactgattta
cttggaaaatatcctgatctcatggaggagttcaatgacttcctggagcattgtgagaat
ctagatggtttccttgctggcgttatgagtaaaaaatcactctgtactgatggacatgtt
tcgagatcattgaaagctgatgaaaaagacaaagagcacaagcgtgaactggaaagtgct
aaagaaaaggatagaggaagagagaaatatttggcaaaatcaattcaagagcttgacctt
tctaattgtgaacgctgtactccaagttaccggcttcttccagtggattatccaatagcc
atggctagccagagatctgggcttggtgctcaagtgttgaacgatcactgggtttccgtg
acttctggaagtgaggattactcttttaaacacatgcgcagaaatcagtatgaggaaagc
ttatttagatgtgaagatgataggtttgagctggacatgctgttagagtctgtgagctct
actgccaagcgtgccgaggaattgttgaacaagatgaatgaaaattaccctaatctggat
tccccaatccggatggaggactactttactgctttaaatcttaggtgcatcgaacgttta
tatggtgaccatggtcttgatgcaatggacatattgcggaagaacccgactcttgcactg
cctgttattttaactcgtctgaagcaaaagcaagaggagtgggcaaggtgtcgctcagat
tttaataaggtctgggctgacatatatgctaagaatcattacaaatcacttgatcatcgc
agcttttatttcaagcaacaggattcaaagaacttgaatgggaaatctctggtgactgag
atcaaggagttgaaagagaagctgcagaaagaggatgatgttattcttgcttttgctgct
ggaaacaaacaacatttggttcctcattttgaatatgaatactctgatgtcagcattcat
gaagagttgtataaacttgttcaatattcatgtaaagaggtttgctcaactaaagaacag
ttgaacaaagttatgaggttttggactaccttcttgttgcccatgttgggtgttccttca
tggccttatgtgtcagcaagttctgccgatgttggaaaagctaacgatactgctacaaat
gttaccgcatctagcatagaagaaggtgatggtagtcctgctctagatgctatgacaaat
agttccataaaaccagctactcatgtggatggatgctctttattaggactagcaaaatgt
tccagcatgaggttggcaaatggagatactatggctaaagaagagagtatgatttgtgta
aatcgtgtatggaaaagtgatgtgacaagtgataatcaacagctaggaagacaggaaaaa
aatacagatatgactgacagaatttctggatatagcatacaaatcgcctctgttcaagtg
gctggagattccagtgcgccacttacagaaaacagtcatcgaagaaccagtgccgaagtg
acagcagggcgtgttgtgatcccatctccacatagtgatgatgacattgaggaccacaag
ctaaaagctagaactgatattgcatcttcatcaaagggtgaagatgctgcaaaaccaatt
ttacctccaaatggagtgcctacaaacagcactaaagttaacagataccatgaagatgct
gctgggcccgccaaaattgaaaaggaagagggtgagttatcgcctattggagattttgag
gaggataatttcgctgtctatgaaaatactgatgtgcaagtaatgcccaagggaaaagac
cttaatggaagtaggcaacaaaaatcaggaaaggaggagggattatgttgtcaggatact
ggaggaaacgatgcagatgctgatgatgaggacagtgaaaatgcatccgaggctggtgat
gatgtttcaagcagtgaatctgctgatgatgagtgctctcgcgaagagattggagaggag
gaagatgttgaacatgatgaaatcgatggtaagggtgagagtgaaggtgaagctgagggc
atggctgatacacagttccttggaggaggagatagttcatcattgccatcagaacgtttt
cttttgtcggtgaagcctgttgcaaagcatataccatcaggtttagttaatgaagaaagg
aaggattctcgggttctttatggaaatgatgatttctacatcctgtttaggcttcaccaa
actttatatgaaagaattttgtcagcaaaaaaaaattcaaccggtgtcgaaatgaaatgg
agaaactcaaaagatgctgattctcctgatccgtatgcaagatttatgagcgtgctatac
aatttgcttgatggctctgctgacaatgcaaagttcgaggatgaatgccgagctattata
ggaaaccagtcttatgtgttattcacactggacaagttaatatataaattggtcaagcag
cttcagactgttgcaaccgatgagatgggctataagcttcttcagctgtgcgagtatgag
aaatcccggcaacccgggaagatgattgattcggtgtattatgagaatgcacgttccctc
cttcaagaggagaatatatttcgatttgaatgttcatctgccccatcccgtttatcaatc
caattgatggacaatgcaactgagaagcctgaggcgttggctgtttccatggatcctgat
tttggggcttatctttacaacgattttctgcctgtatttcctggcaaaaaggagccacac
ggcattataatgcgaagaaacatgcgtaaatatgttggccttgatgaatattctgctata
tgcatggcaacggaaggtgctacaattttcaatggccttgagtgtaagatagcttgcagc
tcatacaagatctcctatgttttggacacagaagattttttctttcgtttgaaaaggaaa
agaagaaatgtgtcaagggatggatctttctatcatgatcaaagtcagtcaagagtacag
cgtttcgtcaaattcttatcggcctcgtga
DBGET
integrated database retrieval system
