Tripterygium wilfordii (thunder duke vine): 120000142
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Entry
120000142 CDS
T07256
Name
(RefSeq) fanconi-associated nuclease 1 homolog isoform X1
KO
K15363
fanconi-associated nuclease 1 [EC:3.1.21.-
3.1.4.1
]
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
120000142
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
twl03400
]
120000142
Enzymes [BR:
twl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.1 phosphodiesterase I
120000142
DNA repair and recombination proteins [BR:
twl03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
Other FA pathway factors
120000142
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VRR_NUC
FAN1_HTH
FAN1_TPR
HIRAN
Cys_rich_KTR
Motif
Other DBs
NCBI-GeneID:
120000142
NCBI-ProteinID:
XP_038703974
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All DBs
Position
1:5527038..5547923
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AA seq
957 aa
AA seq
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MLAGRESLVRLVGKRRRFLPNGHSLSTLVQSNDGEVVSVETVEGLSENSTKVEDEDSAVE
MVTSDWVICPVCGNRVRGEAYNVNCHLDSCLSRGTKRKLTQRTLLQMKFCSGSVAHTSFC
ESEQLETNVDLMGLDNNEGKTALSGFIFSSTIEGNYSNCVVIPSNPESSMETCMDGSTVN
GINSDGVDNKVEASLAINNEVPNCDMAVSVNNLSGLVIETFIVGRRFSDEKEINLGAAIS
LLRDPKNVKDPNAIKVISADAGCSKVLGFLPRDLAQHLSPLIDKYSLIFEGSVTSIPKHS
LNVVPIQIVCCNMNLQSSMESGDIEVFTFLWKNVLTVATSAKIHPPDVTKYQQNFCLLLQ
EVLRSNPHLFTDDEKEYMESFTSLPVDSQRLFVRLYMRKGPWFRMSNILYREVLNSQEAV
KALCAAGYLRRFEDSYGMHDNEMKEILDLVTLSELREIMCMLKKNCKHGTRKQDLIASLV
SLYKDGLCLLLPNLILDRTGTCIKISSKVESLLWRAERLFFLNSEQDLSAFLLVDMGVVK
YPTYRCIISEPIFTDREDLLAYEEAIGVAQLMDQSLDDNDKESVLRCMKIADSRMCGSST
NSFRSTESEPLVIFLSCFSASWVYSKVVLLGVSFLEREHRYNDAIVLLKRLLICFPHDGR
RGYWRMRLSIDLEHMGCPNESLSVAEDGLVDPWVRAGSKVALQRRVLRLAKPPRRWKVPS
FSQSVKREIREVHIQGRPLNCETGMKSRFYGEDGEQCGVEQLALQYYAGEGEGWQGVHTE
SGIWLTIFGLLMWNILFSDAPNVFRTRFQTAPLDLETDSFYEVRKDIIESHLQKIQDGMA
EEILITSWELYLGTACRGVNWERNSLSELRAVVTCSGGPFLASLCRYLAQDYRSWSSGMP
DLVLWRFHGEYMGQMKLVEVKGPRDRLSEQQRAWLLLLMEIGFNTEICKVSPLQVSS
NT seq
2874 nt
NT seq
+upstream
nt +downstream
nt
atgctagccggaagagagagcttggtcagattggttggtaaacgcaggcgattcctccct
aatggtcactctctatctaccctagtccagagtaatgatggagaggttgtatccgtagag
actgtggaaggattatcagaaaatagtactaaagtggaagatgaagatagtgcggttgag
atggtcacttctgattgggtcatttgtcctgtttgcggtaacagagttagaggagaagcc
tacaacgtcaactgtcatttggattcatgcctatctagagggaccaagcggaaattgact
cagcgcactcttcttcagatgaaattttgctctggatctgtagctcatacaagtttctgt
gaatcagaacagttggaaaccaatgtggatttgatgggtcttgataacaacgaaggaaaa
actgctttatctggatttatcttctctagtaccatcgaaggaaactatagtaattgcgtc
gtcataccatcaaatccagagtcctctatggaaacttgcatggatggttcaactgtgaac
ggaatcaatagtgatggggttgacaacaaggttgaagcttcgctggccataaataatgag
gtgcctaattgtgacatggctgtttctgtgaacaacttatccgggctggtaattgaaact
tttatagttggccgtcggtttagtgatgaaaaggagataaatcttggggcagccatctct
cttttaagagaccctaagaatgttaaggatcccaatgctatcaaggttatttctgcagat
gctggatgctctaaagttcttggttttctgcctcgagatttagctcagcatttgtctcct
ttgattgataagtactccctgatatttgaggggtctgtaacttctattccaaagcattct
ttaaatgttgttcccatccagatcgtttgttgcaatatgaatttgcaaagttctatggag
tctggtgacattgaggttttcacatttttgtggaaaaatgttcttactgtagctacctct
gcaaaaattcatcctcctgatgtgacaaaatatcagcagaacttttgtttgttattgcaa
gaggtgttgaggagtaaccctcacctttttactgatgatgagaaagaatacatggaatct
ttcacttcactcccagttgacagtcagaggctctttgttcggctctatatgaggaaaggg
ccatggttccgaatgtcaaatattttataccgagaagttttaaattctcaagaagcagtc
aaggcgctttgtgcagccggttacttacgtcgctttgaagactcatatggcatgcatgac
aatgaaatgaaggagattttagatttagtcactttgtcagagctacgtgaaattatgtgc
atgcttaaaaagaattgcaagcatggtacaagaaagcaagaccttattgcgtcccttgtt
tctttatacaaagatgggctatgccttttgctgcccaatttaattctggaccgtacagga
acttgtatcaagatatcttcgaaagtagaatctcttctctggcgcgctgagaggcttttc
ttcctaaattcagagcaggatttgtcggcatttcttttagttgatatgggcgtagttaaa
tatcctacatacaggtgtataatatcggaaccaatttttacagatcgagaggatctgcta
gcttatgaagaggccattggagtggcacagctaatggatcaatctcttgatgataatgac
aaggaatcagtgttaagatgtatgaagatagctgactcccgtatgtgcggctctagtact
aactcatttcggtccacagaatctgaacctctggttatttttctttcatgcttctcagca
tcatgggtatactccaaagtggtgctgttaggagtgtcctttcttgagcgtgagcacagg
tacaatgatgcaatagttctcctcaagcggctgctaatatgtttccctcatgatgggaga
agaggatactggagaatgagattatctattgacttggagcatatgggttgtccaaatgag
agcctttctgttgctgaagatggactagtggatccatgggtgcgtgctggttcaaaagtg
gcactccaaaggagggttcttcggcttgcaaaaccaccaaggcgctggaaagttcctagt
ttttcccagtctgtcaaaagggagataagagaggttcatattcaagggagaccattgaat
tgtgaaactggtatgaagagcagattctatggagaggatggagagcaatgtggggtggag
caacttgctctgcaatattatgctggagaaggagaggggtggcagggtgttcatacagag
agtggcatttggttgacaatatttgggcttctcatgtggaacattttattttctgatgct
ccaaatgtcttccgcactagatttcagactgctcccttggatttggaaactgatagcttt
tacgaggtgagaaaagacattatagaatcccacttacagaagattcaagatggaatggcc
gaggaaatcttaatcacatcatgggaattgtatttaggaaccgcatgtaggggagtcaac
tgggagcggaattctctctctgaacttcgtgctgttgttacatgctctgggggccctttt
ttggcctcactttgtcgatatcttgctcaagattatagaagctggtctagtggaatgcca
gatttggttctgtggcgcttccatggagaatacatgggtcagatgaaacttgttgaagtg
aaaggccctcgagatcgtctctctgagcagcagagagcatggctattgctgttaatggaa
attggattcaatacagaaatttgtaaagtaagccctttgcaggtgtcaagttga
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