Tripterygium wilfordii (thunder duke vine): 120000270
Help
Entry
120000270 CDS
T07256
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 21-like
KO
K12858
ATP-dependent RNA helicase DDX23/PRP28 [EC:
5.6.2.7
]
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120000270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
twl03041
]
120000270
Enzymes [BR:
twl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
120000270
Spliceosome [BR:
twl03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
120000270
Complex C
U5 SnRNP specific factors
120000270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
Motif
Other DBs
NCBI-GeneID:
120000270
NCBI-ProteinID:
XP_038704183
LinkDB
All DBs
Position
6:complement(3133532..3136163)
Genome browser
AA seq
723 aa
AA seq
DB search
MKRPFDNDNGSTSAGIAANNTAKPVFLTKAQREQLALQRRQQEIEQQQKKRQEELLSVPR
PSDTTSHKPSDSDRRDRDRERERDHDRERDHDRKRDRDRDRERERDRERTRQRDRESERK
NREREREEEAKARERARLEKLAEREREKELEAIKEQYLGSKKPKKRVIKPSEKFRFSFDW
ENTEDTSRDMNVIYQNPHEAQLLFGRGFRAGMDRREQKKLAALNEKELLEEIRRKEGVEE
KPEEAAARKLKEEAADMYDTFDMRVDRHWTEKKLEEMTDRDWRIFREDFNISYKGSKIPR
PMRSWDESKLTPELLKAVERAGYKTPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLP
MLTYISRLPPMSEENEAEGPYAVVMAPTRELAQQIEDETVKFAHYLGIKVVSIVGGQSIE
EQGFRIRQGCEVVIATPGRLIDCIERRYAVLNQCNYVVLDEADRMIDMGFEPQIMAVLDA
MPSSNLKPENEDEELDEKKIYRTTYMFSATMPPAVERLARKYLRNPVVVNIGTAGKATDL
ISQHVMMVKESEKFSRLQRLLDDLADKTAMVFVNTKKNADMVAKNLDKNGYRVTTLHGGK
SQEQREISLEGFRTRKYNVLVATDVAGRGIDIPDVAHVINYDMPNNIEMYTHRIGRTGRA
GKTGVASTFLTFQDTEVFYDLKQMLIQSNSPVPPELAKHEASKFKPGTIPDRPARRNDTV
FTH
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgaccgtttgacaacgacaatggctccacttccgctggaattgccgcaaacaac
accgccaaaccggtcttcttaaccaaagctcaacgcgaacaattagcccttcaacgccgc
caacaagaaatagaacagcagcagaagaaacgccaggaggaacttctctccgtgccccgt
ccctccgacaccaccagccataaaccatctgattccgaccgcagggaccgggacagggag
agggagcgcgaccatgaccgggagcgagaccatgaccggaaacgtgaccgcgacagagac
agagaacgcgagcgagaccgtgagaggacacgtcagcgggaccgagagtctgagcggaag
aaccgcgagcgggagcgagaagaggaggcgaaagcacgcgagcgtgcacgtttggagaaa
ttggcagagagagagcgagagaaagagcttgaagcaattaaggaacagtacctgggttct
aagaaacctaagaagagagtgattaagccaagcgagaagttccgcttctcttttgattgg
gaaaacactgaagatacgtctagggacatgaatgtgatatatcagaacccgcacgaggcc
cagctcttgtttggaaggggttttcgtgctggaatggatcgaagagagcagaagaagctc
gccgccctaaatgagaaagagttgcttgaggagattcgtcggaaggagggtgtggaggag
aagcctgaggaggctgcagcgagaaagctgaaggaggaagctgctgatatgtatgatact
tttgatatgagagttgatcgccactggacagagaagaagcttgaggaaatgactgacaga
gattggagaattttcagggaggatttcaatatatcatataagggatccaagattcctagg
cctatgaggagttgggatgagagtaaactgactcctgagcttctgaaggctgtggaaagg
gcaggctacaagacgccatcgccaatccagatggctgccattccacttgggttgcaacaa
agagatgtcattggcattgcggagactggttctggtaagactgctgcctttgttttacct
atgcttacttacatttcaaggctgcctcctatgagtgaggagaatgaggctgaagggcct
tatgctgttgtaatggcccccactcgtgaactagcccagcaaattgaagatgagactgtt
aaatttgctcattatttgggtatcaaagtagtgtcaattgttggtgggcagtccattgag
gagcaaggttttaggattagacaaggttgtgaagttgtgattgcaactccaggtcgtttg
attgattgcatagagagacgttatgctgttctgaaccagtgcaactatgttgttcttgat
gaggctgaccgtatgatagatatgggttttgagcctcaaataatggcagtattggatgcc
atgccttcaagcaatctcaaaccagaaaatgaagatgaagagcttgatgagaagaagatc
tacagaacaacttatatgttcagtgctaccatgccaccggctgtggagcggcttgcgagg
aagtacttaaggaatcctgttgtggtcaacattggcactgctggcaaggctaccgactta
atttcccaacatgtaatgatggtgaaggaatcagagaaattttcacggctacagagattg
cttgatgatctagcagataaaacagcaatggtttttgttaacacaaaaaagaatgcagat
atggttgccaagaatcttgataaaaatggctatcgcgtgacaactttgcatggtggtaaa
tctcaggagcagagagaaattagccttgaagggttcaggactagaaagtacaatgttctt
gttgctactgatgttgcgggacgtgggattgatatccctgacgtggctcacgtcataaat
tatgatatgcctaacaatattgaaatgtacacacatcgtattggtagaaccggccgtgca
gggaagacaggtgtggcctcgactttcttgactttccaggacactgaggtcttttatgat
ctcaagcagatgcttattcaaagtaacagtccggtgccccccgagttagctaagcacgag
gcttcaaaattcaagccaggaacaattcctgacaggcctgccaggcgcaatgacactgtt
ttcactcattga
DBGET
integrated database retrieval system
