Tripterygium wilfordii (thunder duke vine): 120000380
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Entry
120000380 CDS
T07256
Name
(RefSeq) eukaryotic peptide chain release factor subunit 1-2
KO
K03265
peptide chain release factor subunit 1
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
120000380
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
twl03019
]
120000380
03012 Translation factors [BR:
twl03012
]
120000380
Messenger RNA biogenesis [BR:
twl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
120000380
Translation factors [BR:
twl03012
]
Eukaryotic type
Release factors
120000380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
acVLRF1
baeRF_family10
Ribosomal_L7Ae
Motif
Other DBs
NCBI-GeneID:
120000380
NCBI-ProteinID:
XP_038704377
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All DBs
Position
6:3035704..3039097
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AA seq
437 aa
AA seq
DB search
MADAHETDKNIEIWKIKKLIKALEAARGNGTSMISLIMPPRDQISRAAKMLGDEYGTASN
IKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTDDGKEKKVTFDFEPFRPIN
ASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFTVDLPKKHG
RGGQSALRFARLRMEKRHNYVRKTAELATQFYINPATSQPNVSGLILAGSADFKTELSQS
DMFDPRLQAKILNVVDVSYGGENGFNQAIELSSEILSNVKFIQEKRLIGKYFEEISQDTG
KYVFGVDDTMKALEMGAIEILIVWENLDLIRYELKNSTTGELSIKHFNKEQEANANNFRD
SATSAELEVQDKTSLLEWFANEYKRFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLDM
RTFDDLSDDGEVYEDSE
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atggcagatgctcatgagactgataagaacattgagatttggaaaatcaagaaattgatt
aaagcgctggaagctgcaaggggcaatggcacgagcatgatatctcttatcatgcctcct
cgtgatcaaatatcccgggcagctaagatgcttggagatgaatatggaactgcttctaac
atcaaaagtagggtcaatcgtcaatcggtgcttggtgcaatcacttctgcccagcagaga
cttaaactttacaacaaggttcctcccaatgggcttgtgctttacacaggtacaattgta
actgatgatgggaaggaaaaaaaggttacttttgactttgagccattcaggcccattaat
gcatctctgtacctctgtgacaacaagtttcacacggaagctctgaatgaactgttggaa
tctgatgacaagtttggtttcattgtcatggatggtaatggaaccctttttgggacgctg
agcggtaatacccgtgaggttcttcataaatttactgttgaccttccaaagaaacatgga
agaggaggacaatcagctcttcgttttgctcgtcttagaatggagaagcgccataactac
gtgcggaagactgctgaactcgccacacagttttacattaatcctgccaccagccagccc
aatgtttctggattaatactagctgggtctgctgacttcaagactgaactgagtcagtca
gatatgtttgacccacggcttcaggctaaaatattgaatgtggttgatgtttcctatggt
ggggagaatggttttaatcaggcgattgagttgtcttccgaaattctttccaatgtgaaa
tttatacaggagaagcgcttgattggcaaatattttgaggagatatcgcaggatactggg
aagtatgtttttggtgtggatgacactatgaaggctttagagatgggtgctattgagatt
ctaattgtgtgggaaaacctggaccttattaggtacgagctgaagaatagcaccacaggc
gagctaagcataaagcattttaacaaagagcaggaagccaatgcgaataacttccgggat
tcagccacctctgctgaactggaggttcaggataagacctcactgcttgagtggtttgct
aatgagtacaaacggtttggttgcactcttgaatttgttacaaacaaatctcaagaaggt
tcccagttctgccgaggatttggtgggattgggggcattctccgctaccagcttgatatg
agaacatttgatgatctctctgatgatggtgaagtttatgaggattctgaatag
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