Tripterygium wilfordii (thunder duke vine): 120000482
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Entry
120000482 CDS
T07256
Name
(RefSeq) serine/threonine protein phosphatase 2A regulatory subunit B''beta-like
KO
K11583
serine/threonine-protein phosphatase 2A regulatory subunit B''
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
120000482
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
twl01009
]
120000482
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
twl03019
]
120000482
03036 Chromosome and associated proteins [BR:
twl03036
]
120000482
Protein phosphatases and associated proteins [BR:
twl01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
120000482
Messenger RNA biogenesis [BR:
twl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
120000482
Chromosome and associated proteins [BR:
twl03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
120000482
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_13
EF-hand_7
EF-hand_6
EF-hand_1
EF-hand_8
EF-hand_5
P2R3B_EF-hand
wHTH-Calcineurin_assc
DUF4187
Motif
Other DBs
NCBI-GeneID:
120000482
NCBI-ProteinID:
XP_038704503
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All DBs
Position
6:10706352..10716768
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AA seq
540 aa
AA seq
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MEKGLCVGDVAMLDAELLQLPELAPLAFKSNHDFAQKLFYQWLSLPEANRTVTSLLSDAK
AGVPLNVHGNPSTANAAASNSLPSMFPAGSAPPLSPRSSSGSPRIMKQRAGPSNLGSPLK
VVSKPAKELIPQFYFKNGRPPPKELKEQSLLRINHFFYGRSDGLQIHEFKSVTKEICKLP
SFFSPCLFGRVDVNGTGFVTRDAFIDYWINGNMLNMDTATQTYAILKQPDLKYLTQDDFK
PVLRELLATHPGLEFLQSTPEFQERYAETVICRIFYYINRSGNGHLTLRELKRGNLIDAM
QHADEEEDINKVLRYFSYEHFYVIYCKFWELDIDHDFLIEKENLIRYGNHSLTYRIVDRI
FSQVPRKFTSKVEGKMGYEDFVHFILSEEDKSSEPSLEYWFKCIDLDGNGIVTRNEMQFF
YEEQLHRMECMAQEPVLFEDILCQIIDMIGPEDESYITLRDLKGCKLSGSVFNILFNLNK
FMAFENRDPFLIRQERENPTLTEWDRFAHREYIRLSMEEDVEDASNGSAEVWDESLEAPF
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggagaagggtctttgtgttggcgatgtggcgatgctggacgcggagctgttgcagctg
ccggagctggctccattggctttcaaatcgaaccacgactttgcacagaagctcttttat
caatggctctcgctcccggaagccaaccggacggttacatcactgcttagtgatgccaag
gcaggtgttcccctgaatgtgcacggaaatccctctactgctaatgctgccgccagcaat
tcattaccttcaatgtttccagctggtagcgctcctccactttctcctagaagttcttcc
ggttccccccgcatcatgaaacagagggccggtccttctaacttaggttctcctctgaaa
gtagtcagcaagccagcaaaagagttgatacctcagttttacttcaaaaatggccgtcca
ccaccaaaagagctaaaagaacaaagcttgttacgtatcaatcactttttctatggccgc
tcagatggactacagatacatgaattcaaatctgtcactaaggaaatatgcaagctgcca
tcattcttctcaccatgtcttttcggaagagttgatgttaatgggactggttttgtaaca
agggatgcttttattgattattggatcaatggcaacatgttgaacatggacacagcaacc
caaacgtatgcaattctgaaacaaccggatctcaaatacctcactcaggacgacttcaaa
cctgtgcttcgggaactattggcaactcatccaggattagagttcttacaaagtacacct
gagttccaggaaagatatgctgaaactgtaatatgcagaatattttactacataaatagg
tctggaaatggtcatcttacattgagggagctgaaacgtggaaatctaattgacgcaatg
caacatgcagatgaggaggaggacatcaataaagttttgaggtacttctcttatgaacat
ttctacgttatatactgcaagttttgggagctggatatagatcatgatttcttgatcgaa
aaagagaaccttatcagatatggcaatcattcactaacctaccgaattgttgatagaata
ttctctcaggttccaaggaagtttacgagcaaggttgagggaaagatgggctatgaagat
tttgtgcattttatactgtcagaggaggataagtcatccgagccgagtcttgagtattgg
ttcaagtgcatagatttggatgggaatggaattgtgacacggaacgaaatgcaattcttt
tatgaggagcaattgcatcgaatggaatgcatggcgcaagagcctgtgctctttgaggat
attttgtgccagattattgacatgataggaccagaggatgagagctatatcacacttcgg
gaccttaaaggctgtaaactttcaggaagtgttttcaatatactcttcaacctcaacaag
tttatggcctttgagaaccgtgatccattccttattcggcaggaacgtgaaaatccaaca
ttgacagagtgggaccgctttgctcatagagaatatattagactctcaatggaagaggat
gttgaggatgcgtctaatggaagtgctgaagtttgggacgaatcgcttgaggctccattt
tga
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