KEGG   Tripterygium wilfordii (thunder duke vine): 120000491
Entry
120000491         CDS       T07256                                 
Name
(RefSeq) ubiquitin-40S ribosomal protein S27a-like
  KO
K02977  ubiquitin-small subunit ribosomal protein S27Ae
Organism
twl  Tripterygium wilfordii (thunder duke vine)
Pathway
twl03010  Ribosome
twl04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:twl00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    120000491
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    120000491
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:twl03011]
    120000491
   04121 Ubiquitin system [BR:twl04121]
    120000491
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:twl04147]
    120000491
Ribosome [BR:twl03011]
 Ribosomal proteins
  Eukaryotes
   Small subunit
    120000491
  Archaea
    120000491
Ubiquitin system [BR:twl04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   120000491
Exosome [BR:twl04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   120000491
  Exosomal proteins of colorectal cancer cells
   120000491
SSDB
Motif
Pfam: ubiquitin Ribosomal_S27 Rad60-SLD Ubiquitin_2 Rad60-SLD_2 Plexin_RBD Dsc3_N TBK1_ULD UBL_UBAC1 Ubiquitin_5 DUF2604 Thioredox_PDIA6_C Fer2_3 OTU1_UBXL
Other DBs
NCBI-GeneID: 120000491
NCBI-ProteinID: XP_038704515
LinkDB
Position
6:6641986..6642706
AA seq 156 aa
MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKHKKVKLAVLQFYKVDDSGKVQRLRKE
CPNAECGAGTFMANHFDRHYCGKCGLTYVYQTAGGD
NT seq 471 nt   +upstreamnt  +downstreamnt
atgcagatctttgtgaaaaccctaacgggtaagactattaccctagaggtcgagtcgagc
gacaccattgacaatgtgaaatcgaagatccaggataaggaggggatcccaccggaccag
cagcgcctgattttcgccgggaagcagctggaggacggtcgtacactcgctgactataac
atccagaaggagtccaccctccacctggtgctccgtcttcgcggtggtgccaagaagcgt
aagaagaagacctacaccaagcccaagaagatcaagcataagcataagaaggtcaagctc
gccgtccttcagttctacaaggtcgatgactccggtaaggtccagaggctcaggaaggag
tgccctaatgcagaatgcggtgctggtacctttatggccaaccacttcgacaggcactac
tgtggcaagtgcggtttgacctacgtctaccagactgctggcggcgattag

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