Tripterygium wilfordii (thunder duke vine): 120000865
Help
Entry
120000865 CDS
T07256
Name
(RefSeq) probable pectate lyase 5
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl00040
Pentose and glucuronate interconversions
twl01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
120000865
Enzymes [BR:
twl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
120000865
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
120000865
NCBI-ProteinID:
XP_038704953
LinkDB
All DBs
Position
6:4236105..4238060
Genome browser
AA seq
407 aa
AA seq
DB search
MALPLMSLLTLLFASLLLLAPSSISSSPLQDPELVVEEVHKSINTSRRELGFLSCGTGNP
IDDCWRCDPNWESNRKRLADCAIGFGKRAIGGRDGKIYVVTDPSDNDPVNPRPGTLRYGV
IQDEPLWITFANDMVIKLKEELIMNSFKTIDGRGANVHIAGGPCITIQYVTNIIIHGINI
HDCKRGGNAYVRDSPSHYGWRTVSDGDGVSIFGGSYVWIDHCSLSNCDDGLIDAIHGSTA
ITISNNYMTHHNKVMLLGHSDSYKQDKGMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNND
YTQWQMYAIGGSAAPTINSQGNRFYAPNDIVSKEVTKHEDAPMSAWSKWNWRSSGDLFLN
GAFFTPSGAGASTSYAKASSLSARPSSLVGSITAGAGSLLCRKGKSC
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atggcacttccattaatgtctcttctaacactgctctttgcttctcttcttcttcttgct
cccagctccatctcctcctcgccacttcaagatcctgaattagtggttgaagaagtgcac
aagagcatcaatacatcgaggagggaattgggttttctttcatgtgggacgggcaatccg
atcgacgactgttggcggtgcgacccgaattgggagagcaaccggaaacggttggcggat
tgtgcaatcgggtttggtaagcgagcgattggaggccgtgacgggaagatttatgtggtg
acggatccgagtgacaatgatccggtgaacccaagaccaggtacgctcagatacggtgtc
atacaagatgagccactgtggatcactttcgcaaatgacatggtgatcaagttaaaagag
gagttgatcatgaattcgttcaagacaatcgacggtcgaggagcgaacgtacacatagct
ggtgggccctgtattacgattcagtatgtgactaatattataatacatgggattaatatc
catgattgtaagagaggagggaatgcttatgtgagggactctccaagtcattatgggtgg
aggactgtatcggacggtgatggtgtgtccatctttggtggaagttatgtttggattgat
cattgctctttgtcaaactgtgacgacggtctgattgatgcaatccatggatcaacggct
ataaccatctctaacaattacatgacacatcataataaggtaatgttgttgggtcatagt
gatagttataagcaagataagggtatgcaagtcacaattgcttttaatcattttggagaa
ggacttgttcaaagaatgcccagatgcagacatgggtactttcatgtggtgaacaatgac
tacacacaatggcaaatgtatgctattggtggtagtgctgctcctacaatcaatagccaa
ggcaatagattttatgctcccaatgacatagtaagcaaggaggtgacaaaacatgaggat
gcacccatgagtgcatggagtaaatggaattggaggtcttcaggggacttgtttttgaat
ggtgcattcttcacgccatcaggtgcaggagcttcgactagttacgccaaggcatcgagc
cttagtgcgagaccgtcttcgcttgtgggttcaatcacagctggtgctggttcgctgctt
tgcaggaagggcaagagttgctga
DBGET
integrated database retrieval system
