Tripterygium wilfordii (thunder duke vine): 120001034
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Entry
120001034 CDS
T07256
Name
(RefSeq) DNA polymerase lambda-like
KO
K03512
DNA polymerase lambda [EC:
2.7.7.7
4.2.99.-]
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl03410
Base excision repair
twl03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
120001034
03450 Non-homologous end-joining
120001034
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
twl03400
]
120001034
Enzymes [BR:
twl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
120001034
DNA repair and recombination proteins [BR:
twl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
120001034
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
120001034
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B_palm
DNA_pol_lambd_f
HHH_8
NTP_transf_2
Cdd1
BRCT
HHH_5
IMS_HHH_1
IMS_HHH
PTCB-BRCT
DUF6305
Motif
Other DBs
NCBI-GeneID:
120001034
NCBI-ProteinID:
XP_038705176
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All DBs
Position
6:complement(7217654..7224541)
Genome browser
AA seq
484 aa
AA seq
DB search
MAPKATRKKAPSTDPDGIFAGIFAFLTDKRVQPRRLQIWKQKLLQMGATIEEALNKRVTH
VFAMNLDALLEEVSRERLARFKGSVLLYQWLEDCLRLGEKVSEDPYHLEVDAEGENIADK
SLTSHSTNRISSSDDEPSPSKKIRSSSDDSKNLKGEQNSGNDSLHEESNSKGDHHGSFHT
EDPANNSLKPYDTPNKNSSLPYSPPDLNRNITDIFGKLINIYRALGDDRRSFSYHKAIPV
IEKLPFKIESVDQVKHLPSIGKSMQDHIREIVMTGKLSKLEHFEEDEKVRTISLFGEVWG
IGPATAAKLYEKGHRTLDDLKKDDSLTNSQKIGLKYFDDINSRIPRHEVQEIEKLLQKVA
EEILPGVVIVCGGSYRRGKASCGDMDIIITHPDGKSHKGFLAKFVKCLKDMKFLREDLIF
STHSEEGTNSGVDTYFGLCTYPGRELRHHIDFKVYPRDIYAFGLIAWTGNDVLNRRYLQS
FFCF
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atggcgccaaaggcaaccagaaagaaagctccctctaccgatcccgatggcattttcgcc
ggaatcttcgctttcttgactgataagagagtacagcctcgtcgattacagatttggaag
cagaagctgctgcaaatgggtgctaccattgaggaggctctaaacaaaagggtaactcac
gtgtttgcaatgaacttagatgcgcttctcgaagaagtaagcagagaacgcctggcacgc
ttcaagggaagtgttctactctatcaatggctagaggattgcttgaggttaggagaaaag
gtatccgaagatccataccatctggaagtggatgcagaaggggagaatattgcagacaag
tcattgacttctcattcaaccaatagaatcagttctagtgatgatgaaccatcaccttcc
aaaaagataagatcatcctcagatgattcgaagaatttgaaaggagaacaaaattctgga
aatgattctctacatgaggaatcaaattctaaaggggaccaccatggctctttccatact
gaagaccctgcgaacaatagtttgaagccctatgatactccaaacaagaattcatccctg
ccatatagtccaccagatttaaacaggaatatcactgatatatttgggaaacttataaat
atttacagagcattgggcgatgatcggaggtcatttagctatcacaaagctattccagtt
attgagaagttgccatttaaaatagaaagtgtggaccaggtcaaacatctgccatctatt
ggaaaatcaatgcaggaccatattcgggagatagtcatgactgggaagttgtccaagtta
gagcacttcgaggaggatgaaaaggtgcggacaatttcgttatttggggaagtctggggt
attggtccagccacagctgcaaaattatatgagaaagggcatcgtacattagatgatcta
aagaaagatgattcattaacaaattcacagaagataggattaaagtactttgatgatatt
aattcaaggattccacgccatgaggtacaagaaatagaaaaactcctacagaaagttgcc
gaagaaattttgcctggggtggttattgtttgtggagggtcctataggcgtggaaaagct
tcctgcggggatatggacattataataacgcatcctgatggaaaaagtcataaaggtttt
ctggcaaaatttgtgaagtgtttaaaggatatgaaatttttaagagaggatttgattttc
agtacccatagtgaggagggtaccaattcaggtgtggacacatactttggtctttgtacg
tatccaggacgggagctacgccatcacatagatttcaaggtatatccaagggacatatat
gcttttggactcatagcatggactggcaatgacgtattaaatagaaggtaccttcaaagt
tttttttgcttttga
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