Tripterygium wilfordii (thunder duke vine): 120001083
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Entry
120001083 CDS
T07256
Name
(RefSeq) tRNA pseudouridine synthase A-like
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
twl03016
]
120001083
Enzymes [BR:
twl01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
120001083
Transfer RNA biogenesis [BR:
twl03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
120001083
Prokaryotic type
120001083
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-GeneID:
120001083
NCBI-ProteinID:
XP_038705251
LinkDB
All DBs
Position
6:complement(12366115..12368063)
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AA seq
519 aa
AA seq
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MEETDIVKTPLSPPEPQPEEPEAKKLKMSTTTTSDEDTIDANSTADAKTPRTNRYKRRKI
AIFFAYCGVGYQGMQKNPGAKTIESDLEEALFLSGAVPEQDRGNSRRYDWARSARTDKGV
SAVGQVVSGRFYIDPPGFVERLNSNLSSQIRIFGYKRATASFNAKKFCDRRRYVYLIPVF
ALDPSSHRDRESVLASLGSGNVLVKCVECSERGRKIPEAMLKRICEKKVGEIESGISSDN
GDTEMNSKVTENTMLCDNTSSEQGAKGLVDDGISHSVTESKQNEETALNSTIVNDSGVDK
EEEKVNREEEAEKRSSFCYGEEERERFNRILKYYVGSHNFHNFTTRTKAEDPAARRYILS
FDANSPVTVEGIEFVKCEVVGQSFMLHQIRKMIGLAVAIMRNCAPESLISTALQRDVNVT
VPTAPEVGLFLDECFFTSYNQKWKDSHEELSMKEFEEEAENFKMKQIYSHIASTEDKEGV
VALWLHSLNHRNYPDLCGRVVDNATSNGEKSVTVENIAE
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaacagacattgttaagaccccattatctcctccagagccacaaccagaagaa
ccagaagctaagaagctcaaaatgtccaccaccactacctccgacgaggacaccatcgac
gctaatagcaccgccgatgccaaaacccccaggacgaatagatacaagcgccgaaagatc
gctatcttcttcgcatactgtggcgttggttaccaagggatgcagaagaacccaggtgct
aaaaccatcgaatctgacctcgaggaagctctgttcctctccggggcagtccctgagcaa
gaccgtggcaattccaggcgctacgactgggctcgctcggctcgcactgataaaggagtg
agtgcagtgggccaggtcgtatccggccggttctatattgacccgcctggttttgttgag
cgcctcaattcgaatctttcgtcccagattcggattttcgggtacaagcgggcgacagcg
tcatttaatgccaagaaattctgcgacaggaggaggtatgtgtatttgatccccgtgttt
gctcttgatcccagttcgcatcgtgatagagagagtgtgttggctagtttggggtctggg
aatgtgctagttaagtgtgtggaatgctcggagagagggcgtaagataccagaggcaatg
ctgaagcgcatttgtgaaaagaaagtcggggaaattgagtcgggcatttcgtcagataat
ggagatactgaaatgaattctaaagttactgaaaatactatgttatgtgacaatacaagt
tctgaacagggggcaaagggccttgttgatgatggaatttctcacagtgtgactgaatcc
aagcaaaatgaggaaactgctttgaattctacgatagtaaatgattctggggtggataaa
gaagaagagaaagtcaatagagaggaggaagctgagaaaagaagttcattttgttatggt
gaagaggagagggagcggttcaatagaatattaaagtattacgtggggagtcataacttc
cataactttactacaagaacaaaggctgaagatcctgctgctcgacgctacatcttatca
tttgatgcaaattccccagttactgttgaaggtattgaatttgtcaagtgtgaggttgta
gggcagagcttcatgcttcatcagattcgcaagatgattggcctagctgtggcgatcatg
aggaactgtgcacctgagtcgttgatcagtactgctctgcagagggatgtgaacgttact
gtgcctacggctcctgaagttggattgtttttggatgaatgctttttcacatcatataat
cagaaatggaaagacagccatgaagagctatccatgaaagaatttgaagaagaggcagaa
aattttaaaatgaagcaaatatactctcatattgcatcaactgaggataaggaaggagtg
gtggccttgtggttacattcactaaatcaccgaaactatcctgatttatgtggtcgtgtt
gttgacaatgcaacttccaatggcgagaaaagtgttactgttgaaaatattgctgagtga
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