Tripterygium wilfordii (thunder duke vine): 120001242
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Entry
120001242 CDS
T07256
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 3-like
KO
K03011
DNA-directed RNA polymerase II subunit RPB3
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl03020
RNA polymerase
twl03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
120001242
09124 Replication and repair
03420 Nucleotide excision repair
120001242
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
twl03021
]
120001242
03400 DNA repair and recombination proteins [BR:
twl03400
]
120001242
Transcription machinery [BR:
twl03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
120001242
DNA repair and recombination proteins [BR:
twl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
120001242
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_L
RNA_pol_A_bac
Motif
Other DBs
NCBI-GeneID:
120001242
NCBI-ProteinID:
XP_038705391
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All DBs
Position
7:14397395..14401479
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AA seq
318 aa
AA seq
DB search
MDGGISYQRFPRVKIREMKDDYLKFELRDTDASMANALRRVMIAEVPTIAIDLVEIEVNS
SVLNDEFLAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCHSDQTLD
VTSKDLYSSDHSVVPVDFSDIAGHDSSEQRGIIIVKLRRGQELRLRAIARKGIGKDHAKW
SPAATVTFMYEPEIHINEEMMQTLTLEEKMALVESSPTKVLGVDSNQQVVVVDPEAYTYD
DEVLKKAESMGKPGLIEINAREDSFIFTVESTGAMKASQLLLNAIEILKQKLDAVRLSED
TVEADDQFGELGAHMRGG
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atggatgggggaatttcgtaccagaggtttccgagggtgaagatccgggagatgaaggat
gactacctgaagtttgaactgcgggacacggacgcatcgatggcaaatgcgctgcggcgc
gtgatgatcgctgaggtgccgacgatagccatcgacttggtcgagattgaggttaactcc
tccgtcctcaacgacgagttccttgcccatcgtttggggctaattcctcttaccagcgaa
cgcgccatgagcatgcgcttctcccgcgactgcgacgcctgtgacggcgacggtcagtgt
gagttctgctctgtcgagttccacctccgtgccaagtgccactctgaccaaacccttgat
gttactagcaaagatttgtacagctcagatcactcggttgtacccgtcgatttctccgat
atagctggccacgattcttctgagcagaggggaattatcattgtcaagttacgccgtgga
caagaacttaggctacgtgcaatagcaaggaaagggattggtaaagaccatgcaaaatgg
tctcctgcggcaacagttaccttcatgtatgaaccagagattcatatcaatgaagaaatg
atgcaaaccttgacacttgaggagaaaatggccttagttgaaagcagtccaaccaaagtg
ttgggcgtggattctaatcaacaggttgtagttgttgatccggaggcatatacttacgat
gatgaagtgctcaagaaagcagaatctatgggtaagccagggcttattgagatcaatgct
agagaagacagttttatattcacggtggaatctactggtgcgatgaaagcttcccagtta
ctactcaatgccatagaaatcctcaaacagaagctggatgcagttcgactgtctgaggac
actgttgaagctgatgatcaatttggtgagctaggtgcccatatgcgaggtggatga
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