Tripterygium wilfordii (thunder duke vine): 120002160
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Entry
120002160 CDS
T07256
Name
(RefSeq) pentatricopeptide repeat-containing protein At2g15820, chloroplastic-like
KO
K27936
pentatricopeptide repeat-containing protein, chloroplastic
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
twl03041
]
120002160
Spliceosome [BR:
twl03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
120002160
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Gene cluster
GFIT
Motif
Pfam:
LAGLIDADG_2
PPR_2
PPR
PPR_3
PPR_long
Suf
ARM_TT21_N
AEP1
Motif
Other DBs
NCBI-GeneID:
120002160
NCBI-ProteinID:
XP_038706695
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All DBs
Position
7:14984344..14987271
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AA seq
799 aa
AA seq
DB search
MRAALLSPLSFSFLRSLTFSLSHHCHRSHRRGCLLILRSLSSSPISATKPRFSPQVSFAA
EQHSTFIERVAEDEENWNFSAIREGEDFQFNDGGSAGADLKHPQMPALEVKELDELPEQW
RRAKLAWLCKELPAHKVGTLVRILNAQRKWIRQEDATYLAVHCMRIRENETSFRVYKWMM
QQSWYRFDFALSTKLADYMGKERKFSKCREVFDDIINQGRVPSESTFHILIVAYLSAPVQ
GSLDEACSIYNRMIQLGGYQPRLSLHNSLFRALLGKPGGTSKHYLKQAEFIFHNLVTSGL
EIHRDFYGGLIWLHSYQDTIDKERIASLRDEMEEAGIAEDRDVIVSVMRACAKEGDVEEA
ERSWLDLLLADGGLPMQAFVYKMEVYAKIGKPMKSLEIFRDMQECCGSANVAAYHKIIEV
LSQAQEIELAESLMQEFIKTGLKPLVPSFTDLMNMYLNLSLHDKLESTFSQCLRTCRPNR
NLYNIYLDSLVKVGHLDKSEEIFIQMCRDEAINVNSSSCNIILRGYLSSGDYVKAEKIYD
LMCQKKYDIDSPLMEKLEYVLSLSRKEVKKPVSLKLSKEQREILVGLLLGGLLIESDEGR
KNHMIRFEFNESSGIHSVLKRHLYDQYHEWLHPSCKPSDGSDDIPDRFSTILHSYFGFYA
DQFWPKGQLQIPKLIHRWLTPRVLAYWYMYGGHRTSSGDILLKLRGNREGVEKVVKTLRA
KSLDCRVKRNGRVFWIGFLGSNSAWFWKLTEPYILEDVKEFLKAGGQSLDNNRLEDQGIS
FDSGSDSEDKGLDDGGDNS
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgccgctctcttatctcctctctccttctctttcctccgctcacttaccttctcg
ctctctcatcactgtcaccgcagtcaccgacgcggttgcctccttatacttcgctctctc
tcctcttcccctatttcagcaaccaaacctcggttttctcctcaagtctccttcgccgct
gaacagcacagcactttcatcgaacgtgtggcagaggatgaggagaactggaatttttct
gctattagagagggtgaggactttcagttcaatgacggtggcagtgcaggtgcggatttg
aagcacccccagatgccagcactggaggtgaaagagctggatgagctcccggagcagtgg
cgaagggctaagttagcttggctgtgtaaggagcttcctgctcacaaggtgggcacgctt
gtcaggattctgaatgcgcagcgcaagtggattaggcaggaggatgccacctatctcgca
gttcattgcatgcgcattcgtgagaacgagactagttttagggtatacaaatggatgatg
cagcaaagctggtatcgatttgattttgctctttcaaccaagttagcagattacatgggt
aaggagagaaagttctctaagtgtagggaggtatttgatgatataatcaatcagggtcgt
gtaccgagtgaatcaacatttcatattttgattgttgcatatctaagtgctccggttcag
ggtagcctggatgaagcatgtagtatctacaatcggatgattcagctgggaggttaccag
ccccgactgagcttgcacaattctctctttagagctcttctgggcaagccaggaggtact
tcaaaacattaccttaaacaggctgagtttatttttcataatttggtaacctctggactt
gagatacacagggatttttatggtggcctgatttggctacatagttatcaggatacaata
gataaagaaagaattgcatcacttagggatgagatggaggaagctggaatagctgaggac
agagacgtgatcgtctcagttatgcgagcttgtgcaaaggagggggatgtggaggaagct
gaaagaagttggcttgatctcctcctagctgatggtggtctaccaatgcaggcatttgtg
tataaaatggaagtctatgcaaagattgggaaacccatgaaatccttggagatatttaga
gatatgcaggagtgctgcggttctgcgaatgttgcagcataccataagatcatagaggtt
ttaagccaagctcaagaaattgaacttgcagaatccctgatgcaggagttcataaagact
ggactgaagcctcttgtgccgtctttcactgacctgatgaatatgtacttgaatttatcc
ttacatgataaactagagtcaactttctcccagtgcctcagaacatgtcgacctaaccgt
aacttatataatatatatttggattcgttggtcaaagtaggtcatcttgacaaatctgag
gagatcttcattcaaatgtgtagggatgaagcaattaatgtcaacagttcatcatgcaat
atcatattaaggggatacctctcttcaggagattatgtgaaggcagaaaagatatatgat
ttgatgtgccagaagaaatatgatattgactccccattgatggaaaagcttgaatatgtt
ctcagcttgagcaggaaagaggtcaagaagccagtaagcctgaaactcagcaaagaacaa
cgtgagattttagtcggtttgctattgggtggcttgctaattgaatcagatgaagggagg
aaaaatcacatgattcgttttgagttcaacgaaagttctggcatccattctgtacttaag
aggcatttatatgatcaataccatgagtggttgcatccttcttgtaagcccagtgatggc
agtgatgatataccagatagattctctaccatcttgcattcgtattttggtttctatgca
gaccagttttggccaaaaggccagctccaaataccaaaattaattcataggtggctaacg
ccacgagttcttgcatactggtatatgtatgggggccacagaacatcttctggagatatt
ttgttgaagctgaggggaaaccgtgaaggggtggagaaagttgtcaaaactttgagggca
aaatctctggactgccgggttaagagaaatgggagagtgttctggataggtttcctgggg
agcaattctgcgtggttctggaaattgacagagccatatatcttggaggacgtaaaagag
ttcctaaaagcaggaggtcaaagcttggataataataggttagaagatcaaggcataagt
tttgacagcggatctgattccgaggataaggggcttgatgacggtggtgataattcatag
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