Tripterygium wilfordii (thunder duke vine): 120002164
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Entry
120002164 CDS
T07256
Name
(RefSeq) serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform-like isoform X1
KO
K03456
serine/threonine-protein phosphatase 2A regulatory subunit A
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl03015
mRNA surveillance pathway
twl04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
120002164
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
120002164
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
twl01009
]
120002164
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
twl03019
]
120002164
03036 Chromosome and associated proteins [BR:
twl03036
]
120002164
Protein phosphatases and associated proteins [BR:
twl01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
120002164
Messenger RNA biogenesis [BR:
twl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
120002164
Chromosome and associated proteins [BR:
twl03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
120002164
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PPP2R1A-like_HEAT
HEAT
HEAT_2
HEAT_EF3_N
Htt_N-HEAT_1
Vac14_Fab1_bd
HEAT_EZ
PDS5
CLASP_N
Cnd1
HEAT_GCN1
TPR_TNPO3_IPO13_3rd
Motif
Other DBs
NCBI-GeneID:
120002164
NCBI-ProteinID:
XP_038706701
LinkDB
All DBs
Position
7:5252613..5261430
Genome browser
AA seq
587 aa
AA seq
DB search
MAMVDEPLYPIAVLIDELKNDDIQLRLNSIRKLSTIARALGEERTRKELIPFLSENNDDD
DEVLLAIAGELGVFIPYVGGLEHAHVLLSPLETLCTVEETCVRDKAVESLCRIGSQMREN
DLVDCFIPLVKRLAAGEWFTARVSACGLFHIAYPSASEMVKIELRSIYGQLCQDDMPMVR
RSAASNLEMFAATVEPSHLKSEIMSIFDDLTQDDQDSVRLLAVEGCAALGKLLEPQDCVA
HILPVIVNFSQDKSWRVRYMVANQLCELCEAVGPEPTRADLVPAYVRLLRDNEAEVRIAA
AGKVTKFCRILSPDLAIQHLLPCVKELSSDSSQHVRSSLAFVIMGMAPVLGKDATIEQLL
PIFLSLLKDEFPDVRLNIISKLDQVNQVIGIDLLSQSLLPAIVELAEDRHWRVRLAIIEY
IPLLASQLGVGFFNDKLGSLCMQWLQDKVYSIRDAGANNLKRLAEEFGPEWAMQHIIPQV
LEIKNDSHYLYRMTIIHAISLLAPVMGPEITCSKLLPAVVNASKDRVPNIKFNVAKVLQS
LIHIVDQSVVEKTIRPCLIELSEDPDVDVRFFANQALQSIDHVMMSS
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atggctatggttgatgaaccactgtatccaatagctgttctcatagatgagcttaaaaat
gatgacatccagcttcgattgaactcaatccgtaagctgtcgacaattgcacgtgctctt
ggtgaggaacgaacgaggaaggaactcataccgttcttaagtgaaaacaatgatgatgat
gacgaggtgcttcttgcaatagcgggagagttgggtgtgtttattccatacgtcggggga
ttggaacatgcccatgttttactttcacctctggaaaccctttgcactgttgaggaaacc
tgtgtgagagacaaagctgtggagtcattgtgcagaataggttctcagatgagggagaat
gacttggttgactgttttattcctctagtcaagagattagcagctggtgaatggtttacg
gctcgagtttctgcatgtggtctatttcatattgcttacccaagtgcctcagaaatggtg
aagatagaattgcgatcaatatatgggcagctgtgtcaggatgacatgccaatggttagg
aggtctgctgcttctaatctggagatgtttgctgcaacagttgaaccttctcatttgaag
tccgaaatcatgtcgatatttgacgatcttacccaggatgatcaagattctgtgcggtta
ttggccgttgagggttgtgctgctcttggcaaattgttggaacctcaggattgtgttgct
catattctccctgttattgtcaatttctctcaggataaatcatggcgggtgcgttatatg
gtcgcaaatcaattatgtgagctttgtgaagctgtagggcctgaacctactagggcggac
ttggtccctgcatatgtacggttacttcgtgacaatgaggctgaagtacgtatagcagcc
gctgggaaagtgacaaagttttgccggattttaagtcccgatcttgcaatccaacatcta
cttccctgcgtgaaggaattatcatctgattcttcccagcatgtgcggtcttctttggcc
tttgttataatgggaatggctcctgtgttggggaaggatgcaaccattgagcagcttctt
ccaatttttctctcccttttgaaagatgaatttcctgatgtacgcctcaacattatcagc
aagcttgatcaagtgaatcaggttattggaattgatttattgtcccaatcattgctaccg
gctattgttgagcttgcggaggatagacattggagagttcgccttgcaattatcgagtat
attcctttgttggctagccagttgggtgtagggtttttcaatgataaacttggttccctt
tgcatgcagtggctgcaggataaggtttactcaattcgagatgctggtgctaacaattta
aaacgccttgctgaagaatttggtccagagtgggcaatgcagcacataatccctcaggtg
ctggagataaaaaacgattcacattatttgtataggatgactattatacatgctatctct
ctccttgcccctgttatgggcccagaaattacatgttctaaattgttgccagcagtcgtc
aatgcatcgaaggacagagtacccaacatcaaattcaatgtggcaaaggtgctgcagtcc
ttgattcacatagttgatcagtctgtggtagagaagacaattcgaccctgcttgattgag
ctcagtgaggatccagatgttgatgtccgttttttcgccaaccaagcgctgcagtcgatt
gatcatgtgatgatgtctagctag
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