KEGG   Tripterygium wilfordii (thunder duke vine): 120002341
Entry
120002341         CDS       T07256                                 
Name
(RefSeq) DNA repair protein RAD5A isoform X1
  KO
K15505  DNA repair protein RAD5 [EC:5.6.2.-]
Organism
twl  Tripterygium wilfordii (thunder duke vine)
Brite
KEGG Orthology (KO) [BR:twl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:twl03400]
    120002341
DNA repair and recombination proteins [BR:twl03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    120002341
SSDB
Motif
Pfam: SNF2-rel_dom UBA_RAD5A Helicase_C HIRAN zf-C3HC4_3 zf-RING_UBOX zf-C3HC4 DEAD zf-RING_2 zf-C3HC4_2 Prok-RING_4 RING_XB3-XBAT31 zf-C3HC4_4 ResIII zf-RING_5 zf-RING_4 zf-ANAPC11 UBA_Rad5 zf-RING_11
Other DBs
NCBI-GeneID: 120002341
NCBI-ProteinID: XP_038706992
LinkDB
Position
7:2277943..2285613
AA seq 1035 aa
MGSKVTDELLSTVRSVVGSDYSDMDIIRALHMAKGDATAAINIMFDTPSFRKPKTTRKPP
DISSRDSSSDKLVAKKDHENSLSDIKEVDSRETGAGDVGGAVVEDARVITNDSIGSQWWL
VGTGEVSGLSTCKGRALKAGDEFAFTFPAKSGASSPSPGKAFGRGRQVAGCSEIVRFSTK
DSGEIGRIPNEWARCLLPLVRDKKVRIQGFCKSAPNLLGIMDPIHLSISVYINSSMFRKL
HRTTLKATSNSTEQSVVHPLPNLFRLLGLTPFKKAELTPGDLYQKKRPFNSEGAPGLPAS
LLPANKSKNQSQSENDFEPEESISDADLNTIVGVGDHSLLEEMDPPGTLQCELRPYQKQA
LHWMIQLEKGQCLDEAATTLHPCWEGYHLADKRDLVVYLNAFSGEATIEFPSTLQMARGG
ILADAMGLGKTIMTLALLLAHSERGGSLGSRSNSQSSGEGIEVDDIESEFPDPSRKATKF
SGFDKMMKQKNKLITGGNLIVCPMTLLNQWKAEIETHAQPGALSLYIHYGQSRLKDAKIL
AQSDVVITTYGVLASEFSAENSEENGGLLSVRWFRVVLDEAHTIKSSKSQISMAATALVA
DRRWCLTGTPIQNNLEDIYSLLRFLKVEPWGNWAWWNKLIQKPFEEGDERGLKLVQSILK
PIMLRRTKFSTDREGRPILVLPPAHSEVIYCELTDAEKDFYEALFKRSKVKFDQFVEQGR
VLHNYASILELLLRLRQCCDHPFLVMSRGDTQEYSDLNKLARRFLKGGCNSLEGEDKEVP
SRAYVQEVVEELRKGEQGECPICLEAFEDAVLTPCAHRLCRECLLASWHNSTSGLCPVCR
KVISRQDLITAPTESRFQIDIEKNWVESSKIVVLLRELENLRLSGSKSIIFSQWTAFLDL
LQIPLSRLNIPFVRLDGTLNLQQREKVIKLFSEDDNILVLLMSLKAGGVGINLTAASNAF
VLDPWWNPAVEEQAVMRIHRIGQTKNVMIKRFIVKGTVEERMEAVQARKQRMISGALTDQ
EVRTARIEELKMLFT
NT seq 3108 nt   +upstreamnt  +downstreamnt
atgggcagtaaggttacggacgaactcctctccaccgtccgatccgtcgtgggttctgat
tactctgacatggacatcatcagagcactacacatggcaaagggcgacgccactgccgca
atcaacatcatgttcgacacccccagtttcaggaaacccaagacaacgcgcaaacccccc
gatatctcctctcgtgattcgagttctgataaactagtggctaagaaagatcacgagaat
tctttgagtgatatcaaggaagttgattcacgtgaaactggtgcaggagatgttggtggt
gctgttgttgaagacgcgagggttattactaatgattcgattgggagccagtggtggctt
gtgggtactggtgaagtgagtgggttgtcaacgtgcaaagggagggctctcaaggctggt
gatgaattcgctttcacttttccggccaagagtggtgctagttcgccgtcaccagggaag
gctttcggaagagggcggcaagttgcaggctgttcagagattgtcaggttttctacaaag
gacagtggagagattggtcgaataccaaatgaatgggctcggtgtcttttgccacttgtg
agggataagaaagttagaatacaaggattttgtaagtctgctccaaatcttttaggcata
atggacccaattcacttgtcgataagtgtatacatcaatagttctatgttccgcaagctt
catcggacgacacttaaggctaccagcaattccactgagcaatcagtagttcatcctctt
ccaaacttgtttcgcttgcttggtctgacccccttcaagaaggcagaactcactcctggt
gatttgtaccagaagaagcggcctttcaactcagagggtgcacctggtctgcctgcatca
ctgttgcctgctaacaaatcgaagaatcagtctcaaagcgaaaacgattttgaacctgag
gagtccatttcagatgctgatctcaacactattgttggtgttggagaccactccctatta
gaggaaatggatccccctgggacccttcagtgtgaacttcgcccttatcagaaacaggcg
cttcattggatgatccagctggagaagggacagtgcttagatgaggcagcaacaaccctt
cacccttgctgggagggttatcacctggcagataagagggaccttgttgtctatttgaat
gcattttcaggcgaagccacaatagaatttccaagcacacttcaaatggccagaggagga
attctggcagatgcaatggggcttggcaagaccattatgactttagcccttcttcttgct
cattcagaaagaggcggatcactaggtagtcgatcaaatagccaatcttctggtgaaggt
attgaagttgatgatattgaaagtgaatttccggacccttcaaggaaggcaacaaagttt
tcaggctttgataagatgatgaagcagaagaacaagctcataactggtggaaatcttatt
gtgtgtcctatgactcttcttaaccagtggaaggcagagattgaaactcatgcccaacct
ggagctctctcactatatattcactatggacaaagtagactgaaggatgccaaaattctg
gctcagagtgatgttgtgattacaacttatggggttttagcttcagaattttctgcagag
aattctgaagaaaacgggggacttctctcagttcggtggtttagagtggttcttgatgag
gcacataccataaaatcctctaaaagccaaatttccatggctgctactgcactagttgct
gatcgccgttggtgtctgaccggcactcctatacagaacaacctggaggatatttacagt
cttcttcgatttttgaaggtggaaccttgggggaattgggcctggtggaataaacttatc
caaaagccatttgaggagggggatgaaagagggctgaaattggttcaatccattttgaag
cctattatgttaaggagaacaaaatttagcacagatcgcgagggcaggccaattttagtt
ttaccccctgctcatagtgaggtgatttactgtgaactcacagatgctgaaaaagacttc
tatgaggccttatttaagagatccaaggtgaagttcgatcaatttgtcgagcagggaagg
gtgcttcataattatgcttctatattggagttacttttacgtcttcggcaatgttgtgat
catccatttctagtgatgagccgaggtgatacacaagaatattcagatctgaataagcta
gctagacgattcctaaaaggtggttgtaattcacttgaaggggaagacaaagaggtgcct
tcccgggcttatgttcaagaggtcgtggaggagttgcgtaaaggggagcagggagagtgt
ccaatatgtctcgaagcatttgaagatgctgtattaacaccttgtgctcatcggttatgt
cgagagtgtctcttggcaagctggcataattctacgtcaggtttatgtcctgtttgtagg
aaagttatcagtaggcaagatcttattactgctccaactgagagtcggttccagatcgat
attgagaaaaattgggttgagtcatccaaaatagttgttctcttgcgtgaacttgagaat
cttcggttatcaggatctaagagtattatcttcagtcagtggactgcgttcctggatctc
ctacaaattcctctctctcggttgaatattccatttgttcgtctggatgggactctgaat
ctgcagcagcgagagaaagtaataaaactgttttcagaggatgacaatatcctagttttg
ctgatgtcactaaaggctggtggtgttggaattaatctaacagcagcttccaatgccttt
gtcttggatccatggtggaatccagctgtggaagaacaagctgttatgcgaattcatcgc
attggacaaactaaaaatgtgatgatcaaacggttcattgttaagggaacggttgaggaa
aggatggaagcagtgcaagcccggaagcagaggatgatttccggtgccttaactgatcaa
gaagtccgaactgcacgcattgaggaactaaagatgctttttacataa

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