Tripterygium wilfordii (thunder duke vine): 120002990
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Entry
120002990 CDS
T07256
Name
(RefSeq) SNF2 domain-containing protein CLASSY 3
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
120002990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
twl03400
]
120002990
DNA repair and recombination proteins [BR:
twl03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
120002990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
Helicase_C_2
Motif
Other DBs
NCBI-GeneID:
120002990
NCBI-ProteinID:
XP_038707806
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All DBs
Position
7:complement(3672894..3678384)
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AA seq
1065 aa
AA seq
DB search
MDFNAPVCRRTRRQCDLRLERLYAESKGIEPSPSVPVPVPVKELSSSADSDSSEESEGTD
SDSGHVVHRKGKRKRVVDDDSTEVIVLDDSDDGGEEEIGSASASVNVGFTERNEYLGEDA
DDNGSRTEEIRIRGGGGRGKVSKKADVDDDIWIEEVRIGGCGGRGKGVRKANVDEVANKT
TDAGVESESESGISERDCDDDYWVSADDGKDIELGLSSSQDTSDDDFERGVTLSGVTIGE
SEKKRKKEVEEKHGSRKSKNWPTEELGRKGRKGEGKGRAAFSKNLDIYRLLANSIWEKDK
PLEGEEEDGDITLEESHDQTRENPHKVPLPLKFTFGIEEPEPMVKSEEEIELENLWAEMD
FASKCEEVGSNNFAEVEDENANRSGEANSDSLCSQGMHKFVLDEEIGIYCTFCHYVKDEI
RHIFPPVEKLPTEVSSKKISSNGGNISFDVLQGDFGDPCNDITDGTVWSIIPGTRQTMYP
HQQEGFEFVWRNLAGTTDLEKLKNNDSNGGGGGCIISHAPGTGKTRLTLVFLQSYLKLFP
NCRPVIFAPASLLLTWEEEFQKWDVGIPFHNINNRELSGKEDTMAVSILERARCQNQFNP
IRMVKLYSWSKKESILGISYSLFMTLVGDKGTVGIKNERLLKEAEEMKKILLELPGLLVL
DEGHTPRNKRSRIWNALTKLKTEKRIILSGTPFQNNFHELYNTLKIVRPAFEEKIPLRLK
QFGKYYYNSRKKLRLDEANEKKLDAGSSVPDDAIEEFRCLMSPFVHVHKGNILLRSVPGL
KDCVVVLTAANVQKKLLEIIEHTQSPNVLDFEHKLSMVSVHPTLLLDCALSEKEEALIEE
SSVGRGVLEKLRYNHSEGVKMRFLIEFVRLMQATKEKVLVFSQFIPPLDLIMEQLASMFN
WSKGKEVLHMHGKLDHKERQATIHVFNDPDSEAKVLLASTKACSEGISLIGASRVILLDV
VWNPSVERQAISRAYRLGQKRLVFTYHLIVAGTAEWKKYRKQTEKERISELVFTSTTKED
GKQTQDNLSSEDQVLDELVQHDKLKDVFKKIIYQPKEASLLDSFS
NT seq
3198 nt
NT seq
+upstream
nt +downstream
nt
atggattttaatgcgccggtttgtaggaggactcgtcgccaatgcgatttgaggttggaa
cggttgtatgcagagtccaaaggtatcgaaccatctccgtcggttccggttccggttccg
gtaaaggagttgagtagtagtgctgattctgattctagcgaggagagtgaaggaactgac
tctgactctggccatgttgttcatcgtaaaggtaagagaaagagggttgttgatgatgat
tcgactgaagtaattgtcttggatgacagtgatgatggcggagaagaagaaattggttct
gcatctgcatctgtgaatgttgggtttacagagaggaatgagtatttgggtgaggatgcg
gatgataatggtagtcggaccgaggagattcggatacgaggaggtgggggacgtggaaag
gtcagtaaaaaggcagatgttgatgatgatatttggattgaggaggttcgaataggagga
tgcgggggacgtggaaagggtgttaggaaggctaatgttgatgaggttgcaaacaagact
actgatgcaggggttgagagtgagagtgagagtggcatcagtgagagggattgcgatgat
gattattgggtttcagcggatgatggtaaagacattgaattgggtttgagttcatctcag
gatactagtgatgatgattttgagagaggtgttacgttatctggcgttaccattggagaa
tctgagaagaagaggaagaaggaagttgaagagaagcatgggagtaggaaaagcaagaac
tggcctacggaggagctgggaagaaagggaaggaaaggggaagggaaaggcagagctgct
ttctctaagaatcttgacatttatcgacttcttgctaactcaatttgggagaaagacaaa
cccttggaaggtgaggaggaagatggtgatattacattggaggagagccatgatcaaaca
agagaaaatcctcataaggtgcctcttcctttgaagtttacctttggtattgaggagcca
gaaccaatggtgaaatctgaagaagagatagagctggaaaacttgtgggccgagatggac
tttgcctccaaatgtgaggaagttggctccaacaattttgcggaggttgaggatgaaaat
gcaaatagatcaggcgaagccaatagtgacagtctttgttctcaaggcatgcataaattt
gtccttgatgaggagattgggatttattgcaccttttgtcactatgttaaggatgaaatc
agacacatttttcctcctgtggaaaagcttcccactgaagtttctagcaagaaaatttca
tccaacggtggaaatatttcatttgatgtacttcaaggtgattttggtgacccctgcaat
gatattactgatggcacagtttggagcatcattcctggaactaggcaaaccatgtatcca
caccaacaagaaggctttgagtttgtatggaggaatttggctggaaccacggatctggaa
aagttgaaaaacaatgattcaaatggtggtggcggtggctgcattatttcacatgcccct
ggaactgggaagaccaggctaaccttagtatttcttcagtcatacctgaaactttttcca
aattgccggcctgtcatttttgctcctgccagcttgcttcttacttgggaggaagagttc
caaaaatgggatgttggaattccttttcataacataaacaatcgagaactctcgggaaag
gaagatacaatggctgtgagcattctggagcgtgctaggtgccaaaaccaatttaatcca
attcgtatggtgaagctgtactcctggagcaagaaagaaagtatactagggatcagctac
agtttgtttatgacacttgttggagataaaggaactgtagggattaaaaatgaaaggctc
cttaaagaagctgaagagatgaagaagattcttcttgagttgcctggcttgctggttctt
gatgagggacatacaccccggaataagagaagcagaatttggaatgcccttacaaagctt
aaaactgagaagcggatcatactttctggcacgcctttccaaaataacttccatgagctc
tataacacattaaagatagtaagacctgcctttgaagagaaaattccattaaggctgaag
caatttggcaagtattactataattcaagaaagaagttgagactagatgaggcaaatgag
aagaagttggacgctggcagctcagttccggatgatgctattgaagagtttagatgtcta
atgtctccatttgttcatgtccacaaaggcaacattctattgaggagtgttcctggattg
aaagactgtgtggtggttttaacagctgctaatgtacagaagaaacttctagagatcatt
gaacatacacagagtccaaatgtccttgattttgaacacaagttatctatggtctctgtc
cacccaaccctgcttttggactgtgctttgtctgagaaagaggaagcactcattgaggaa
tcatctgttggtcgcggtgttcttgaaaagctaaggtataatcacagtgaaggggtcaaa
atgagattccttatagagtttgtccgtctcatgcaagcaactaaagagaaagttctggtt
ttcagtcagtttattcctccattagatttgataatggagcagcttgcttcaatgttcaat
tggtcgaaagggaaggaagttctccatatgcatggaaaactagatcacaaggagcggcaa
gcgaccatacatgttttcaacgaccctgatagcgaagctaaggttctgttagcatcaacc
aaggcttgctccgagggtataagtcttattggggcgtcaagggttatcctgctagatgtt
gtttggaacccatcagttgaaaggcaagccataagtcgggcttatagacttggccagaag
agacttgtgttcacttatcatcttatagtagcagggaccgctgagtggaagaagtaccgc
aaacagacagagaaggagcggatatctgaattggtttttacctctacgaccaaggaagat
ggtaagcaaacacaggataatttatcttctgaagatcaagtcttggatgagctggttcag
catgacaagctcaaagatgttttcaagaagataatttaccagcccaaggaagcaagctta
ctggatagcttttcttga
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integrated database retrieval system
