Tripterygium wilfordii (thunder duke vine): 120003259
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Entry
120003259 CDS
T07256
Name
(RefSeq) sm-like protein LSM1B
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
120003259
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
twl03019
]
120003259
Messenger RNA biogenesis [BR:
twl03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
120003259
mRNA degradation factors
5'-3' decay
Lsm complex
120003259
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Hfq
Motif
Other DBs
NCBI-GeneID:
120003259
NCBI-ProteinID:
XP_038708091
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All DBs
Position
8:2422759..2427003
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AA seq
128 aa
AA seq
DB search
MSWAGPEDILLSTSLASYLDKKLLVSLRDGRKLLGILRSFDQFANAVLEGACERVIVGEL
YCDIPLGLYVIRGENVVLIGELDLEREELPAHMTCVSVPEIRRAQKAEREATDLKGSMMK
RMEFLDLD
NT seq
387 nt
NT seq
+upstream
nt +downstream
nt
atgtcttgggctggtcctgaagacattctcctatccacttctcttgctagctatcttgac
aaaaaacttttagtatcgctccgagatggtcgaaaactcttggggatacttcgttctttt
gatcaatttgccaacgctgttcttgagggtgcatgcgagagagttattgttggtgaactt
tattgtgacatccctttaggcctatatgtaattcgaggggagaatgttgttttaattggc
gagctggatttggagagagaggaacttccggcccacatgacttgtgtatcagtgccagaa
attagaagggcacaaaaagctgagagagaagctacagacctgaaaggttcaatgatgaag
agaatggagttccttgatttggattag
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