Tripterygium wilfordii (thunder duke vine): 120003420
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Entry
120003420 CDS
T07256
Name
(RefSeq) DNA replication ATP-dependent helicase/nuclease JHS1
KO
K10742
DNA replication ATP-dependent helicase/nuclease Dna2 [EC:
5.6.2.3
3.1.-.-]
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
120003420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
twl03032
]
120003420
Enzymes [BR:
twl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
120003420
DNA replication proteins [BR:
twl03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
120003420
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
120003420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dna2
AAA_12
AAA_11
AAA_30
AAA_19
UvrD-helicase
Cas_Cas4
nSTAND3
ResIII
Dna2_Rift
Motif
Other DBs
NCBI-GeneID:
120003420
NCBI-ProteinID:
XP_038708333
LinkDB
All DBs
Position
8:complement(11006431..11020809)
Genome browser
AA seq
1394 aa
AA seq
DB search
MPPRKKSNASSSTSKKSNSNQHTQPSKFGIQHFFERHSQSQILKTATVPIHQNSKPSSIS
ETSPRSNTASESEIDRKSVANSTTGAASGAQDPKKAPSSVLSISDNHKNSSRLKEIKFNE
ETENTPPEDLLTKSIDVEVSPDVPKSISLKRFKFSPGMLIKQSQDDGGDEITWKISPVNE
KLQSVSKHMPEMIRVLADSSRLNALTIHKCSQNKNTSGTAKEIEEWISSPRPKSTERSLL
SANKFGLKRVNPFQDTDFHGTANDVNSGLCSQQSPFLTPPSLSFSHSKLANGVTCNGISD
QLELRHHKKALLELLDQVEDAISVEDTRSNGTDSSLKVQSKNSDKLLGKHNPPAERVSVD
SPEEVARPSSDSYFLVLEVYEKRGSADGSGAQQTYKILRLLNEQSGEERSVYLWEDWYYS
IIAPGDTVNVIGEFDEKGKCDVDRENNLIIVHPDILVSGTRVAASFSCSRRTVLDERLRS
SEHSTAALIGTMLHQIFQAGLMKEFPTIKFLKDYARIVLLKNIESLYACGGNENDMLKTL
IEAIPKMLNWIVVFRDSQDSKASTVDFGSEDGQSKVGISEVIDIEEMAWAPKYGLKGMID
ASLRVKFQSKKNEVKEKIMPLEFKTGKVPNGQSSTEHRAQVILYTLLMSERYLKHIDNGL
LYYLQSDGTQGIKVRRSDLVGLIMSRNELANDILKASTTQELPPMLQIPNMCKSCRHLDV
CSIYHKAHGGTVESSGLGEIFHSRVSHLTTSHIVFLRHWDRLIDLEAKQMQLGKKQTLLA
QKLKTDQAASCLRSIVLDPSDELQLQKSHNDDRFIYRFVHQHSPSRNVDASVGDSTNSAL
SPTIELDCTLSTGDYVVLSTESGRLNVARGIITDISRKHVSVSFSKRLRLPGSNPSSEAY
DLLQEVWQMSKDEFMTSFSVMRYNLIQLFLPTVRSSHLRKMIVDLEAPRFDSGCLFSQDP
AISYIWSEKNLNDDQRRAILKILTAKDYALILGMPGTGKTSTMVHAVKALLLRGSSILLT
SYTNSAVDNLLIKLKAQGIDFVRIGRHEAVHEEIQANCFSATNLHSVEEIKLRLDQVKVV
AVTCLGITNPLLANKRFDVCIMDEAGQTTLPVCLGPLMFASIFVLVGDHYQLPPLVQSAE
ARENGMGISLFCRLSEAHPQAISALRSQYRMCQGIMDLSNALIYGERLRCGSSEIANAKL
KLSSLRPRCSWLNEVLNPSKPVIFINTDKMCAFETREQKTVNNPTEAYIIAKVAEELVNS
GIEGEDVGIITPYNSQTSLIRLIVNVTSVEIHTIDKYQGRDKDCILVSFVRSSENPRNCS
SSLLGDWHRINVALTRAKKKLILVGSCATLSKFPLLKLLINKVDEQSGILSLSKTDIDEK
GVLKRCSRLRLSHI
NT seq
4185 nt
NT seq
+upstream
nt +downstream
nt
atgcctcccagaaagaaatcgaacgcgtcttcttcaacatcaaagaaatcgaattcgaat
caacacacgcagccttcgaagttcggcatccaacatttcttcgaacgccactcccaatct
cagatcctcaagaccgccacagttcctatccaccagaactctaaaccatcttccattagt
gaaacgtctcctcgctccaacactgcaagtgaatctgaaattgatcgaaaatcagtggcg
aatagcacgacgggtgccgcttcaggtgctcaagaccctaagaaggcacccagttcagtt
ctttctatttcggacaaccataaaaattcatcgaggttaaaggaaattaagtttaatgaa
gaaactgagaatacgcctccagaagatctccttacgaaatccattgatgttgaggtgtcc
ccggacgttcccaagtccatatcacttaagcggttcaaattctctcctgggatgctgata
aagcaaagccaggatgatggtggtgatgaaattacctggaaaatatctccggtgaacgaa
aaactccaatcagtgtcaaagcacatgccagagatgataagagtgttggcagattcttca
aggctcaacgctttgactattcacaaatgctcacaaaataagaatacttctggtactgct
aaagagattgaggagtggatttcttctccaagaccaaagtccactgaaagatctttgtta
tctgccaacaagtttggtttgaaaagggtaaacccgttccaagatacagattttcatggc
actgcaaatgatgtaaatagcggcctttgtagtcaacaaagtccctttcttactcctcca
tctctatccttttcccacagtaagcttgctaatggtgttacctgcaatgggatatctgat
cagctagaattgcggcaccataaaaaggcactgcttgaacttttagatcaagttgaagat
gcaatttctgttgaagacacacgatcaaatgggacagactcatcattgaaagttcaaagt
aaaaacagtgataagttgcttggtaagcacaatcctcctgccgaaagagtgtcagtggat
tcaccagaagaagtcgctcggccttcatctgattcttatttccttgtattagaggtgtat
gagaagcgtgggtctgccgatggctccggtgctcagcagacgtataagatccttcgttta
ctaaatgagcaaagtggagaagagcgatctgtttatttgtgggaagactggtattacagc
atcattgctcctggtgatactgtaaatgttattggtgaatttgatgagaagggaaaatgt
gacgttgatcgtgaaaataaccttataattgttcacccagacattctggtctcaggaact
cgggtcgctgctagtttcagctgttctagacgaactgttctggatgagaggttaagaagc
agtgagcattcaactgcagcattaatcggtaccatgctgcaccaaatttttcaggctgga
ctcatgaaggagtttcctaccataaagttcttgaaggattatgcaagaatagtgctcctg
aaaaacattgagagcctatatgcctgtggaggcaacgaaaatgatatgctcaaaacattg
attgaggctatcccgaaaatgttaaattggattgtcgtctttagagattctcaggattca
aaagcctccaccgttgattttggatctgaggatgggcagagcaaagtcgggatatctgag
gtaattgatattgaggagatggcatgggcccctaaatatggtttgaaaggaatgattgat
gcttctctcagagtaaaatttcaatcaaagaaaaatgaagtgaaagagaagattatgcct
ttagagtttaaaactggaaaagtacccaatggccagtcatctacagaacaccgcgctcaa
gtgatcttatacactctccttatgtctgagaggtacctaaagcatattgataatggtctt
ttatactatctccagtcagatgggacacagggaatcaaggttcgaagatctgacttggtt
ggactaatcatgagtcgtaatgaacttgcaaatgatattcttaaggcatcaacaactcaa
gaacttcccccaatgttacagattccaaatatgtgcaagagttgccgccatcttgatgtt
tgtagcatctatcataaggcccatggcggaactgtagagagtagcggattgggtgaaatc
tttcattcgcgtgtttcccacttaacaacttctcatattgttttccttcgacactgggat
aggttgattgacttagaagccaaacagatgcagcttggaaagaaacaaacactgcttgcg
caaaagttgaagactgatcaagctgctagttgccttcgttccattgttcttgatccttca
gacgaacttcaacttcagaagtctcataatgatgatcgcttcatctatcgttttgtacat
cagcattcaccatctcgcaatgtagatgcttctgtgggagattcaacaaatagtgctttg
tctcctacaattgaattggattgtactcttagcacgggagactatgtggtactcagcaca
gaatctggccgtcttaatgtagcaagagggattataacggatattagccggaaacatgtt
tctgtttcattctctaagcgactaaggctgccagggagcaatccttcttctgaggcatat
gatcttcttcaggaagtctggcagatgagcaaggatgaatttatgacatcattttctgtt
atgaggtacaatcttatacagctatttctcccaacagttcgaagttcccacctcaggaag
atgattgttgaccttgaggctcctaggtttgacagtggatgtttatttagccaagatcct
gctatatcttacatatggtcggagaagaatttgaatgatgatcaacgtcgggctattctg
aagatacttacggccaaagattatgctctaatactaggaatgcctgggacaggcaagact
tctaccatggtgcatgctgtgaaggccttgttgctgagaggttcctccattttgcttaca
tcctacacaaattctgctgttgacaatttactgatcaagttgaaagctcagggtattgac
tttgtacgtattggaagacatgaggctgtgcacgaggaaatccaggccaattgcttttct
gcaacaaacttgcacagtgtcgaagagattaaattgagacttgaccaagtcaaagttgtt
gctgtaacttgcttgggaattactaatcccttgctagccaacaaaagatttgacgtatgc
atcatggatgaagctggacagactaccctaccagtatgcttgggacctttgatgtttgct
tcaatatttgtccttgttggcgatcattatcaattacctcccctagtccagagtgcagag
gctcgagaaaatggaatgggaataagtttgttttgcaggctttcagaagcacatcctcaa
gcaatatcggcattacgaagccagtatcgtatgtgtcaaggaattatggacctatcaaat
gccttaatatacggagagagattgcgttgtggttcttctgaaatagctaatgccaaacta
aaactttcaagtttacggcctcgttgttcctggctaaatgaggttttaaatccaagcaaa
cctgttatatttattaatactgataagatgtgtgcctttgaaacaagagaacaaaagact
gtaaataaccccaccgaagcatacataattgcaaaggttgcagaggaactagtcaactct
ggtatcgaaggtgaagatgttggcataattaccccctataactcgcaaacaagtcttatc
cgtctcattgttaacgttacttctgtggagatacataccattgacaaataccagggaaga
gataaggactgcatattggtgtcctttgtcaggtctagtgaaaatccaaggaactgctct
tcatcacttcttggagactggcataggattaatgtcgcacttactcgtgccaagaaaaag
ttgatcctggtaggttcctgtgcaaccctatcaaagtttccattgttgaagcttctcatc
aataaggttgatgaacaatcaggcattttgagtttgtccaagacggatattgacgagaaa
ggagtgctgaagaggtgttctcgcttgagattatctcatatttag
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