Tripterygium wilfordii (thunder duke vine): 120003505
Help
Entry
120003505 CDS
T07256
Name
(RefSeq) tRNA pseudouridine synthase A isoform X1
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
twl03016
]
120003505
Enzymes [BR:
twl01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
120003505
Transfer RNA biogenesis [BR:
twl03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
120003505
Prokaryotic type
120003505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF835
Motif
Other DBs
NCBI-GeneID:
120003505
NCBI-ProteinID:
XP_038708443
LinkDB
All DBs
Position
8:complement(4989084..4996171)
Genome browser
AA seq
383 aa
AA seq
DB search
MTENPKDSLETHSETPTRPSKIQKIEEFSIEDEEDQSQQQGPEESGTAANPMSQNPRIQR
YFVAIEYIGSRFSGSQQQLNCRTVVGVLQEAFQKFIGQPVSIFCSSRTDAGVHALSNVCH
VDVERISKRKPGEVLPPHEPAVVRKAVNHFLQKNEGDIMVVDVRYVPSDFHARYKAKERT
YFYRLLSGPDSLSTFEKDRAWHVPEELNLLAMQEACKVLVGCHDFSSFRAAGCQASSPIR
TLDELHVSEVPPTPYFPSTLEREQERQQNSLSREDSLACSTVSETDLRISSVSNSCAVGL
STGGTNVGFGVRRKHRCYVVTARSRSFLYHQVRLLVGVLKSVGTGDLTVSDVERILNAKT
VTTASPMAPACGLYLGQVKYDLP
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgacggaaaatcccaaggattctcttgaaacccactctgaaactcccacaaggccttca
aagatccagaaaatcgaagaatttagtatcgaagacgaagaagatcaatcacaacaacaa
ggaccggaggaatcaggcactgctgccaaccccatgagccaaaaccccagaattcagcgt
tattttgtcgctatagagtacattggctctcgcttctccggctcacagcagcagctcaac
tgcagaactgtagttggagtgctccaggaggcttttcaaaaatttattggccagccggtt
tcaatcttctgctccagtaggactgatgctggagtacatgccttatcaaatgtttgccat
gttgatgtggaacgtataagcaagaggaagcctggtgaagttttaccgcctcatgaacct
gcagtggtgagaaaagctgtcaaccatttcttacagaagaatgaaggagacataatggtg
gttgatgtccgttatgtgccatctgattttcatgcaagatataaagcaaaagagcgcacg
tacttctaccgcttgctatcaggaccagatagtttgtctaccttcgagaaagatcgggca
tggcatgtacctgaggaattaaaccttcttgccatgcaggaagcatgcaaagttcttgtt
ggatgccatgattttagttccttcagggcagctggttgtcaggcaagttcaccgatcagg
actctagatgaactgcatgtttcggaggttcctccaacaccatattttccatcaacgctt
gaaagagaacaggagaggcaacaaaacagtttaagcagggaagattctcttgcatgctcg
acggtgtctgagactgacctgcgtattagttctgtttccaacagttgtgctgttggccta
tccactggaggaactaatgtgggatttggagtaagaagaaaacatcgttgctatgttgta
acagcacgttcccgctccttcctttaccaccaggttagattgcttgttggcgttctcaaa
tctgttggcaccggtgatttaactgtttctgatgttgaaagaatcctgaatgcaaagact
gtgaccactgcaagtccaatggccccagcttgcggtctctaccttggccaagtgaaatat
gatctgccgtga
DBGET
integrated database retrieval system
