Tripterygium wilfordii (thunder duke vine): 120003681
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Entry
120003681 CDS
T07256
Name
(RefSeq) single-strand DNA endonuclease 1
KO
K15338
holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
twl03400
]
120003681
DNA repair and recombination proteins [BR:
twl03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
120003681
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Chromo_SEND1
XPG_I
XPG_N
XPG_I_2
Chromo_2
Chromo
Chromo_shadow
Motif
Other DBs
NCBI-GeneID:
120003681
NCBI-ProteinID:
XP_038708629
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Position
8:complement(749313..754574)
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AA seq
580 aa
AA seq
DB search
MGVKNLWDILESCKKTLPLHHLQNKRVCIDLSCWMVQLQNVNKSRCAIKEKVYLRGLFHR
LRALIALNCSLIFVADGSVPAIKVSTYRRRLNSGCEVAQDETNAQNLASLRRNMGSEFSC
MIREAKILGLALGIPCLDGIEEAEAQCALLNSESLCDGCFTSDSDVFLFGARTVFRDICL
GEGGHIVCYEMEDIEERLGFGRNSLITLALLLGSDYSRGVHGCGPESACHIVKSIGDNVV
LQQVASEGMSFAKKPKGQRKHAQPNADGSDHISQKGSQFLQVIDAYVNPKCHSADSDAVH
RALVQHPFQRTKLQQICDQFFGWPPKKTDEYILPKIAERDLRRFANLRATSSGLGVKLPL
DKTPVECPVSEIVKHRKVQGRESFEVLWKELDGLATSIVPADLVESACPEKIVDFEEKRA
LGKKQNRCKPRRNKSELRSVADIEFKLESLLLDIELGSNTACSLPFPCRALVPGSKTSVV
EVDYMKKDLPLDANSEINTYYNPSIPCFRTVSNTDRSEVIDLSSPSPLMHFRTTSRPEQK
RSQTVNVIDLSDSEADMSPEHERKARELRLFLASLKDGIP
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atgggcgtaaagaacttgtgggatatactagaatcctgcaagaaaactcttccgcttcac
cacctccagaacaagagagtatgcatagatctctcttgttggatggttcaacttcagaac
gtcaacaaatcacgctgtgcaatcaaggagaaggtctacctcagaggcctctttcaccga
ctcagggctctcatcgctttgaactgtagccttatcttcgtcgctgatggatcagttcct
gctatcaaagtatctacatacagacgccgattgaattcaggatgtgaagttgctcaggat
gaaacaaatgctcaaaatttggcttcgcttcgaagaaatatgggatctgagttctcatgc
atgattagagaagcaaaaatccttggattagcacttgggatcccttgtttagatgggatt
gaggaagctgaagcacaatgtgcattgttaaactcagaatcattatgtgatggttgtttc
acttcagattcagatgttttcctctttggcgcaaggactgtttttagagacatttgcctt
ggagaaggaggtcatatcgtttgttatgaaatggaagacatagaggaaagacttgggttt
ggaagaaactcattgattactctagcccttcttcttggtagcgattattctcggggagtt
cacggctgcggcccagagtcagcttgtcatattgttaaatcaattggagacaatgttgtc
cttcaacaagttgcatcagagggaatgtcctttgcaaagaagccaaaaggtcaacgaaaa
catgcacagcctaatgcagatggaagtgatcatatctcacaaaagggatctcagtttttg
caagtgattgatgcatatgtgaatcccaagtgccactcggcagattctgatgcggttcat
agggctcttgtacaacacccttttcaacgtaccaaacttcagcagatatgtgaccagttc
tttgggtggccacctaagaagacagatgaatacatccttcctaagattgccgaaagagat
ttaaggcgatttgccaatttgcgtgcaacttcatcagggttaggagttaagcttccacta
gacaagacgccagttgagtgtcccgtttcagaaattgtgaaacacagaaaagttcagggt
agagaatcctttgaggtgttgtggaaagagttggatggactggcaacctctatagttcca
gcagatcttgtagagagtgcttgccctgaaaagattgtggattttgaggaaaaaagagct
ctagggaagaaacaaaaccgttgcaaaccaagacgaaataaatcagaactaagatcggtt
gctgatattgagtttaaacttgaaagtctgttgcttgacatcgaattgggaagcaatact
gcttgtagtttgccatttccctgcagagcacttgtaccaggaagcaagacctctgttgta
gaagttgattatatgaagaaagatcttccacttgatgcaaattcagagataaatacctat
tacaatcctagcatcccttgttttcgaactgtttcaaataccgacagaagtgaggtcatt
gatctctcgagtccctcgccactgatgcatttccgaactacttccaggcctgaacaaaag
aggagtcaaaccgttaatgtgatagacttgagtgattcagaagcagacatgtcccctgaa
catgagaggaaggctagagagcttagattgttcctagccagcttgaaggatggcatccct
tag
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