KEGG   Tripterygium wilfordii (thunder duke vine): 120003684
Entry
120003684         CDS       T07256                                 
Name
(RefSeq) splicing factor 3B subunit 1-like
  KO
K12828  splicing factor 3B subunit 1
Organism
twl  Tripterygium wilfordii (thunder duke vine)
Pathway
twl03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:twl00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    120003684
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:twl03041]
    120003684
   03036 Chromosome and associated proteins [BR:twl03036]
    120003684
Spliceosome [BR:twl03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    120003684
 Complex B
    120003684
 Complex C
   U2 SnRNP specific factors
    120003684
Chromosome and associated proteins [BR:twl03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    120003684
SSDB
Motif
Pfam: SF3b1 PPP2R1A-like_HEAT TOR1L1_N HEAT_EZ HEAT HEAT_EF3_N HEAT_ECM29 HEAT_2 Htt_N-HEAT_1 XMAP215_CLASP_TOG Vac14_Fab1_bd ParcG Adaptin_N
Other DBs
NCBI-GeneID: 120003684
NCBI-ProteinID: XP_038708633
LinkDB
Position
8:3539641..3544245
AA seq 1264 aa
MDPEIAKTQEERKKMEEELASLTSLTFDRDLYGGGDRDGYVTSIAVNDDEEANDAMDNEV
VRKMASYTAPRSLLKEMPRGGDEDDNNLGFQKPAKIIDREDEYRRRRLQRVISPERHDAF
AAGEKTPDPSVRTYAEVMREEALKREKEDTIRAIAKKKKEEEEAAKEGGGTAAAAPVPKR
RNRWDQSQDEGGAAAKKAKTQSDWDLPDATPGIGRWDATPTPGRIGDATPSLSRRNRWDE
TPTPGRLADSDATPAGGATPGATPAGTTWDATPKGLVTPTPKRQRSRWDETPATMGSATP
MAGATPAAAYTPGVTPVGGVELATPTPGAINLRGPMTPEQYNLLRWEKDIEDRNRPLTDE
ELDAIFPQEGYKILEPPASYVPIRTPARKLLATPTPLGTPLYSIPEENRGQQFDVPKEAP
GGLPFMKPEDYQYFGALLNEDDEEELSPEEQKERKIMKLLLKVKNGTPSQRKTALRQLTD
KAREFGAGPLFNRILPLLMQPTLEDQERHLLVKVIDRVLYKLDELVRPYVHKILVVIEPL
LIDEDYYARVEGREIISNLSKAAGLATMIAAMRPDIDNIDEYVRNTTARAFSVVASALGI
PALLPFLKAVCQSKKSWQARHTGIKIVQQIAILIGCAVLPHLRSLVEIIEHGLNDENQKV
RTITALSLAALAEAAAPYGIESFDSVLKPLWKGIRSHRGKVLAAFLKAIGFIIPLMDAIY
ASYYTKEVMVILIREFQSPDEEMKKIVLKVVKQCVSTEGVEAAYIRSDILPEFFRNFWVR
RMALDRRNYRQLVETTVEIANKVGVADIVGRIVEDLKDESEPYRRMVMETIEKVVTNLGA
SDIDARLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNSLGQRVKPYLPQICGTIKWRL
NNKSAKVRQQAADLISRIAVVMKQCGEEQLMGHLGVVLYEYLGEEYPEVLGSILGALKAI
VNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEFVPAREWMRICF
ELLEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKVQERQNRVCTTVAIAIVA
ETCSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDR
DLVHRQTAASAVKHMALGVAGLGCEDALVHLMNYVWPNIFETSPHVINAVMEAIEGMRVA
LGASVVLNYCLQGLFHPARKVREVYWKIYNSLYIGAQDALVAAYPILEDEQSNSYSRPEL
MMFI
NT seq 3795 nt   +upstreamnt  +downstreamnt
atggatccggagattgcaaagacacaggaggagcgtaagaagatggaggaagagcttgcc
tctcttacctcccttacatttgaccgcgacctctatggtggcggtgaccgcgatggctat
gtcacttcgattgccgtcaacgatgatgaggaagccaatgacgccatggataacgaggtt
gttcgcaaaatggcctcatacactgcccctaggtcgttgctgaaagagatgcctcgtggc
ggtgatgaggatgataataacttggggtttcagaagccggccaagattatcgatcgagag
gatgaatatcgaaggagaaggctgcagcgagtgatttcacccgagaggcacgatgccttt
gctgctggggagaagactcctgacccctcggtgaggacgtatgcggaggtgatgagggag
gaggcgttgaagagggagaaagaagatactataagagcaattgcgaagaagaagaaggaa
gaggaggaagcggctaaggaaggtggaggaactgctgctgcggctccagttcctaagagg
aggaatcggtgggaccagtcgcaggatgagggtggtgctgcggcaaagaaagctaagacc
caatctgattgggatttgcctgacgctactccagggattgggcgatgggatgcgaccccg
acaccagggaggataggtgatgcgactccttctttgtccaggaggaatagatgggacgaa
actcctactcctgggaggttggcagattcagatgccacccctgctggtggtgctacacca
ggggcgactcctgccgggactacctgggatgccactccaaaggggcttgtgactccaaca
ccaaaaagacagcgatcaagatgggacgagactccagctaccatgggaagtgcaacccca
atggcaggtgctacaccagctgctgcttatacacctggagttactcctgtcgggggagtt
gagttggcgactcctactccaggggcaattaatctgcgtggtcctatgacacctgagcag
tacaatttattgaggtgggagaaggatattgaagacaggaacagacccttgactgatgag
gagcttgatgcaatatttccacaagagggatacaagattctggaacctccagcctcctat
gtgccaattaggacaccagctagaaagctactggccacaccaacgcctttaggaacgccc
ctttattcgattccagaggaaaatcgtggccagcagtttgatgtgccgaaagaggcgcct
ggtgggctgccgtttatgaagccagaggattatcagtattttggggcacttttgaatgag
gatgatgaagaggaattgtctcctgaggagcaaaaggagcggaaaatcatgaagcttttg
ttgaaggttaagaatgggactccttcacagaggaagactgctttgaggcagcttactgat
aaagcccgagaatttggtgctgggcctttgtttaaccggattttgcctttgctcatgcaa
cccactttggaagaccaagagagacatcttctggtgaaggtaattgatagggttctgtac
aaattggatgagttggttaggccttatgtgcacaagattcttgtggtgattgagcctttg
ctgattgatgaggattattatgcacgtgttgaaggtagagagatcatttctaatttgagc
aaagctgcaggtttggctactatgattgctgctatgcgtcctgatattgataacatcgat
gagtatgttaggaacacaactgctagagctttcagtgttgttgcttctgcccttggtatt
cctgcattgttgccattcttgaaagctgtgtgtcagagtaagaaatcatggcaagcacgt
catacaggtatcaagattgttcagcagattgcaattttaataggttgtgctgttcttcct
catctaaggtctcttgttgaaataattgaacatggtctaaatgatgagaaccagaaggtg
aggacgatcactgctttgtccctggctgctcttgcagaggcggctgccccttacggtatt
gagagctttgactctgtattgaaaccattgtggaagggtattaggtcacaccgtggaaag
gtcttggctgctttcttaaaggcaataggttttatcattcctctcatggatgcaatttat
gcaagctactatacaaaggaagttatggtcattttgattagagagttccagtcgcctgat
gaagaaatgaaaaagattgtgctcaaagtggtgaaacagtgtgttagtacggagggtgta
gaagctgcatatattcgtagtgatatccttcctgaatttttcaggaatttctgggtcaga
aggatggctttggaccggaggaactacaggcagcttgtggaaacaactgtggagatagca
aacaaggtaggagtagctgacatagtagggcggatagttgaggatctcaaggatgagagt
gaaccttatagacgaatggttatggagacaattgagaaggtggtgacaaacttaggtgca
tccgatattgatgccaggttggaggagcttctgattgatggtatcctttatgccttccaa
gagcagaccagtgatgatgccaatgtgatgcttaatgggtttggcgctgttgtaaattct
cttgggcagagagtgaaaccttaccttccacagatttgtggtactattaagtggcgcttg
aataacaagagtgcgaaggtgaggcagcaggctgcagaccttatttcgaggattgctgtt
gtcatgaaacagtgtggagaggaacaactcatgggtcatctcggcgttgtcttgtacgag
tacttgggagaagaatacccagaagttcttggatcaattctgggagctctcaaggcaatt
gtgaatgttattggtatgacgaaaatgactcctcccataaaagacttgcttcctaggttg
accccaatattgaagaacaggcatgagaaagtgcaggagaactgtatagatcttgttggt
cgtattgcagatcgtggtgctgagtttgttccggctagagagtggatgaggatttgtttt
gagcttcttgagatgcttaaagctcacaagaagggtattagacgagcaacagtgaacact
tttggatatattgccaaagccattggaccacaagatgtcttagctaccctgttgaataac
ctgaaggtgcaggaacgtcagaaccgtgtttgcacaactgttgcaattgctatagttgca
gaaacctgttctcctttcaccgtcttaccagctctgatgaatgagtatcgtgtcccagag
cttaatgtgcagaatggtgttctgaaatctctttccttcttgttcgagtacattggtgag
atgggtaaagactacatatatgcagttactccattactggaggacgctcttatggacaga
gatttggttcacaggcagactgcagcttctgcagtgaagcacatggcattgggggttgct
gggttgggttgtgaggatgcgcttgtccacttaatgaactatgtgtggcctaacatattt
gagacatctcctcatgtcataaatgctgttatggaagctattgaagggatgagagtggcc
ttgggtgcttctgttgtgctgaactactgccttcaggggttgttccatccggctcggaag
gttagggaagtttactggaagatctataactcactgtacattggagctcaggatgccctt
gtggcggcttatcctatcttggaggatgagcagagtaactcatatagtaggcctgagctg
atgatgttcatctga

DBGET integrated database retrieval system