Tripterygium wilfordii (thunder duke vine): 120003841
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Entry
120003841 CDS
T07256
Name
(RefSeq) uncharacterized protein At3g06530
KO
K14550
U3 small nucleolar RNA-associated protein 10
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
120003841
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
twl03009
]
120003841
Ribosome biogenesis [BR:
twl03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
120003841
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARM_At3g06530
HEAT_HEATR1
BP28CT
U3snoRNP10
TOR1L1_N
Motif
Other DBs
NCBI-GeneID:
120003841
NCBI-ProteinID:
XP_038708891
LinkDB
All DBs
Position
8:complement(1223313..1242010)
Genome browser
AA seq
2161 aa
AA seq
DB search
MASSIAQQLQAIKPFVQADSAALKRPFTRPSILYDPKEAADIDIGTILNVALSGLEVLIS
KDERFRNYQQDLFTHNSIDFDRELKGIEENNNTSTRISSYVRLLSGYLQLPASLKTLEYL
IRRYKIHVYDAEDLILCAMPYHDTHFFVRIVQLIDTGNSKWKFIDGVKVSGAPPPRSVIV
QQCIRDMGVLEALCNYASPTKKFQPSRPVISFCTAVIVEVLGSVTTVNSDDVKKILPFVV
SGLQAGAKVGPDHKAGALMIVGLLAKKVELAPKLVKSLIRSIAEIAREDAKESTDLHWFR
SSLMALINLVQLQAIDVFPKKALEFLKETREIAGIILGLFKEFNIDGFLTLLLESLVEYS
SSDDSCRLALLSIIETVPVNNLVGHVVFKVLSSCVKLSQKKSDSTPPESGSWAKKILVAI
NKKYPSKFNQAVWKFLEDEKVQATKGDATFEILSTMLDGNLDSSTVIPDSKIWLVLNHPK
AEVRRATLSGLKASGFLISKDVDSQRFINIRDAVLCQLRDDDLTVVQAALSLEGFSKILE
SSDVLEALHDVLQRCYRMSSLLDNSSVAGDVSYSFLKIAISCFHNQINNSKQLATIMFPF
ILIFPKTQRFNMKVLQLAKEVEWPIYQSLTGVSIEEMKLQPERVSSINMETVGILAETFL
LHPDEYLPWFIKSCNDLASSKTLFYLVLMQSFILQKSRRGQSFTFFEACFPVLKTDWEVV
ESAVDFSISEFNTEMLDADCRRFLDQLFDTEVKALNINILICVLWRFLEAFVSTMPSDIV
LDDNDKWVCKLRDMFVFFATSRLKHVFKEPLHYIVTKSKILPGHFLSGFFTEEDVAVATQ
VESLHCFAFVCSQSDDSLLFQLLAEFPSLLVPLSSNSQDTRIAAMGCIEGLHALCPRVDF
LSKKNGNNITWSHSLDELLGLMVQQKRLILSDKNFLPSFLTSLLGSSCNSIIVPRNLGQR
LDQSTKEKNIAFILGSSLKLSAFAKLMILSLLNGLGNAIIRIKDVELLLSLLLKRRNEYC
LEQDIQSEKLSKTEVKILCLLLEICALPTSSSDGRDYAEYLLKALRVHNTSSEDLAIIKP
CVTVLRSLRGQFYSGLTTEMQERFFHEFVLLFRDGNGDIQNATREAMLQLNITWSTVVKS
LEFIFTLESCTINMTPGKKKKSMRRHKYGMNSDVIPKGENALSCLSSLLDILVLKKDIVN
RDRLLGPLFKLLRNIFSDDWVNGTLAQNEEWIEASAGVSQTLFGTISYIQQTLLIILEDV
VGSLNTSFPLKDDIINDIDVKLLVDCANSAKAGVTRNHVFSVLTSIAKVIPKKILEHIFD
ILPVVGQSAVSQIDSHSQRVFEDFISVVVPCWLSETGNPDKLLQIFVNVLPQVDEHRRLS
IVVYLLRTLGESNGLASLLMLLFHSLVLRKGSICLDDIRASDRGTSSALKDWEYAFAVQI
CGQYSCMIWLPCLVRLLQQIEANNPCPELFMVLLFAMELVLHKLQDPELGIKLESGENLD
KIQITLGYLMEHTVALLELFDAKKKQAVISVGMRRELKECMHAVLRSITRAMIPSAYFRG
ITNLLGHVDRNVTKKALGLLCDVVRNDGRIKSKHKDRGYSNPVISGHWLHMNDSAVESFH
KTCMEIIRIVEDSIDESSTSLKLAAVSALEVLARRFPFDHSIFSMCLKSVTKCITSHNLT
ISSSCLRATGALVDVLGPQALAELPRIMKNLIKKAREITSCVDERMRYINDTPPSVPSIS
NESIMLSVLVTLEAVIDKLGGFLSPYLEDVIDLLVLSPEYTSGPDSKLKLKADTLRKILT
DKITARLALPPLFKIQSRAVESGDSSMTIAFEMLASLVCKMDRSSVAGYHGKIFALCLQA
LDLRRQQPVSIQNINIVEKSVVNAMISLTMKLTENMFKPLFIRSIEWAESDAEEMAYSGI
TNIDRAISFFGLVNKLAENHRSLFVPYFKYLLEGCARYLTDAGDVKATGLTRKKKKAKVQ
GAGVNVNEENNVLAIKKWHLRALILSSLHKCFLYETDKLKFLDSANFQVLLKPIVSQLDT
EPPASLEEFPDIPSVKEVDDLLVVCIGQMAVTAKSDLLWKSLNHEVLMQTRSDQVRTRIL
GLRIVRYLLDNLKEEYSGLLPETFPFIGELLEDAELTVKSLAQDFVKEVELTGVDDIREY
L
NT seq
6486 nt
NT seq
+upstream
nt +downstream
nt
atggcttcttcgatagcccagcaattacaggcaatcaagcctttcgttcaagccgattca
gctgctctcaagagacccttcacccgcccttcaatcctatatgatcccaaagaagctgcc
gatatcgatattggaaccatattaaacgttgctctatcaggtcttgaagttcttataagc
aaggatgagcgatttagaaactatcagcaagatctgtttactcataatagtatcgatttt
gatagagaattgaaaggtatagaagagaacaataacactagtaccagaatcagttcctac
gtaaggttactgtcgggatatcttcaattacctgcatctttgaagacactcgagtatttg
atacgcagatacaagattcacgtgtacgatgcagaggatttgattttatgtgctatgcca
taccatgacactcacttttttgttcgaatagtgcagctaattgacacagggaatagtaaa
tggaaatttattgatggagttaaagtttctggtgcgcctccacccagaagtgttatagta
cagcagtgcatccgtgatatgggagtgctggaggctttatgcaactatgcttctccaaca
aagaagtttcagccgtcgaggcctgtgatcagcttttgcacggctgtcattgttgaggtc
cttggttctgttacaactgttaatagtgatgatgtcaagaaaatccttccatttgtagtt
tctggacttcaggctggtgcaaaagtaggcccagatcacaaggctggtgctttgatgatt
gttggtttgctagcaaagaaagttgaactggcgcctaaacttgttaagagtttaatacgg
tcgattgctgagatagctcgagaagatgcaaaagagtcgactgatctgcattggtttcgt
tcgtcgctgatggctttgattaacctcgttcagttgcaagccattgatgtgttcccgaag
aaggctttggagtttttgaaggaaactagggagattgctggaattattctgggattgttc
aaagagttcaatattgatggattcctcactctgcttttggaatctctggtggaatacagt
tcatctgatgactcatgtcgtctagctttgttatcaatcatagagacagttcctgtaaat
aatcttgtcggccatgtggtttttaaagtcctttcttcctgtgtgaagttgtcacagaag
aaaagcgattcaacaccaccagaatcaggaagctgggccaagaagattttggttgctatc
aataagaagtatccatccaaatttaaccaagcagtttggaaattcctggaggacgaaaag
gtacaagccacgaaaggtgatgcaacatttgagattcttagtactatgttagacgggaac
ttggattcatcaacggtgatcccagattccaagatctggttggtgttgaaccatcccaag
gctgaagttcggcgtgccacattatctggtctaaaagcatctggcttcctgatatccaag
gatgttgattctcagaggttcataaacatccgggatgccgtattgtgccagcttcgcgat
gatgatctaactgttgttcaggcagctttatctcttgaaggattctctaaaatattagag
tccagtgatgttctagaagcattacatgatgtgcttcaaagatgttatcgcatgtcaagt
ttgttagataacagttctgtggctggtgatgtctcttattcattcctgaagattgccatc
tcatgctttcataatcagatcaataactcaaagcaacttgcgaccattatgtttcctttt
atcctaatatttccgaagactcaaaggtttaatatgaaggttttgcaactagccaaggaa
gtagagtggccaatttaccagagtctcactggtgtctctattgaagaaatgaaattacaa
cctgaacgggtatcttcgatcaatatggagactgttggcatcttggctgaaacattctta
ttgcaccctgatgagtatttgccttggtttatcaagagttgcaatgatttggcttcttcg
aagacgctgttttatttggttctgatgcagtcatttatattgcaaaagagtagaaggggg
caatcttttacattttttgaagcttgctttcctgttctgaagactgattgggaagttgtc
gagtctgcagttgatttttcaatttctgagttcaacactgaaatgctagatgcagattgc
agaagattccttgaccagctatttgatactgaagtaaaggcattgaatataaacatttta
atttgtgtgctttggaggtttctagaagcttttgtttcaacgatgccttcagatatagtg
ttggatgataatgacaagtgggtttgcaaacttcgggatatgtttgtcttttttgcgact
tctcgattgaagcatgttttcaaggagccccttcactacattgttaccaaaagcaagatc
ttgcctggccattttctctctggatttttcacggaagaagatgttgcggttgcaactcaa
gttgagagtcttcattgttttgcttttgtttgctctcaatctgacgatagtttgctgttc
caacttctagcggaatttccttcacttcttgttccgctatctagcaatagtcaagataca
aggattgctgccatgggctgcattgaagggctacatgctctgtgtcctcgtgttgatttt
ttaagcaagaagaatgggaacaatataacctggagtcattctcttgacgaacttctgggt
ttgatggttcagcagaaaagacttatattatcagacaaaaattttctgccctcatttcta
acttctttgcttggatcatcctgcaacagcattatagtaccacggaatctaggacagaga
cttgatcaatctacgaaggaaaagaatattgctttcatcttgggttcttctttgaaactt
tcagcatttgccaagctgatgatactatcgctgctcaatggattgggcaatgcgataata
cgtattaaagatgtggagttattgttgtctttgcttttgaaaagacgcaatgaatactgt
ctcgagcaggatatacaatccgaaaaattgtctaaaactgaagtcaagattctgtgcctt
ctactggagatctgtgctcttcccacatcatcatctgatggacgcgattatgcagagtac
ctcttaaaggctttgcgagtgcataatacctcttcagaagatcttgccataataaaaccc
tgtgttactgttctccgaagcctaagaggtcaattttacagtgggttgacgactgagatg
caggagcggtttttccatgagtttgtgctcttgtttcgtgacggtaatggtgatatacaa
aatgcaaccagagaggccatgctgcagttaaatataacttggtccacagtagtcaagtca
cttgaattcatcttcacactggaaagttgcacaattaatatgacacctgggaagaagaag
aaatcaatgaggcgtcataagtatgggatgaattctgatgtgattcctaaaggagaaaat
gctctctcttgtcttagctctctccttgatatattggtgctgaagaaagacattgtaaac
agggatcgtcttttaggtcctttgtttaagctccttcgcaatattttttcggatgattgg
gtaaatggtactctggcccaaaatgaggagtggattgaagcttccgcaggtgtctctcag
accttatttggcacaataagttacattcagcagacattgttaataattttggaagacgta
gttggttctctcaatacatctttcccactaaaggatgacataataaatgatattgacgtc
aaattgttagtggattgcgccaattctgctaaagctggagtcactcgcaaccatgtattc
tctgtactgacctctattgccaaggttattcccaaaaaaatattggagcatattttcgat
atacttcccgttgttggacaatcagcagtctcacagattgatagccattcacagcgcgtg
ttcgaggatttcatatcagtggttgttccttgttggctatctgaaactggcaatccagac
aaattgctccagatttttgttaatgtattgccccaagttgatgagcacaggagactatca
attgttgtgtaccttctaaggactttgggagaaagtaatggcttggcttcattgctcatg
ctccttttccattccctggttttgagaaaaggatcgatttgccttgatgatatccgtgct
tcagatagaggaacatcctcagctctgaaagattgggagtatgcctttgcagtgcaaata
tgtgggcagtattcatgcatgatatggctgccctgccttgttaggttgcttcaacaaata
gaagccaataatccttgccctgaactcttcatggtcttgctatttgcaatggaattagtt
ttgcacaaattgcaggacccagaactgggaatcaagcttgaatctggtgaaaacctggat
aaaatccagataacacttgggtacctaatggagcataccgtagctcttttagaacttttt
gatgcaaagaaaaagcaggcagtgatttctgttgggatgaggagagaattgaaggagtgc
atgcatgctgtcttgaggagtattacaagagccatgatcccctcagcatattttagaggc
atcactaatttgcttggccatgtagatcgaaatgtgactaaaaaggctcttgggcttcta
tgcgacgtagtgagaaatgatggacgaattaaatcgaaacataaggatagagggtactcg
aatccagtcattagcggtcattggctccatatgaatgatagcgctgttgaatcttttcac
aaaacgtgtatggagatcattcggatagttgaggattctattgatgaatcaagtacttcc
ttaaaactggcagcagtttcagcactagaagttttggcccgcagatttccttttgatcat
tctatctttagcatgtgtcttaaatcagttacaaaatgcatcacttcgcataacttgact
atctcttcgagctgccttcgagcaactggtgccttggttgatgtccttggaccacaggca
ttagctgagctgcctcgaataatgaaaaacctgataaagaaagctcgtgaaataacttca
tgtgttgatgagagaatgagatatattaatgatacccctccatctgtaccgtcgatttcc
aatgaatctattatgctatctgttcttgttactttggaggcagttatagacaagcttgga
ggttttttgagtccttatcttgaagatgttatagatcttttggtgctttctcctgagtat
acatcaggaccagattcaaagctgaaactgaaagctgatacattacgaaagattcttacc
gataaaattactgcgcgccttgctctgcctcctttgtttaagatacagtctcgtgctgtt
gagtcgggggattcaagcatgacaatcgctttcgaaatgttagcaagtttagtttgtaaa
atggacagatcatctgttgctggttatcatggaaagatttttgctctctgcttgcaagct
cttgatcttcgccgacaacaacctgtttcaattcaaaacataaatattgtagaaaaaagt
gttgtgaatgcgatgatttctttgacaatgaaacttacagaaaatatgttcaagcctctt
ttcatcagaagcattgaatgggctgagtcagatgcagaagaaatggcctatagtgggatc
actaacatagaccgggcaatatctttctttggccttgtgaataaacttgctgaaaaccat
cggtctctctttgtcccttactttaagtatttgcttgagggatgtgcacggtatcttact
gacgctggagatgtaaaagctactgggttgactcgaaagaaaaagaaggccaaggttcag
ggtgcaggagttaatgtgaacgaggaaaacaatgtgttagcaatcaaaaagtggcacctt
agggcattaatattgtcatcactacacaagtgttttctctatgagacggacaaactgaag
ttccttgactccgcaaactttcaggttctgttaaaacccattgtctctcagcttgatact
gaaccaccagcgtccctagaagagtttcctgacataccatctgtcaaggaggttgatgac
ctgttggttgtttgcattggtcaaatggccgtcactgcaaaatctgaccttctatggaaa
tccttgaaccatgaggtattgatgcaaactcgtagtgatcaagtgcggacccgaatttta
gggctcagaattgttagataccttctggacaacctaaaggaagaatattcggggttactg
cctgaaacattccccttcattggtgaattgctggaggatgcagaattgactgtcaagtct
ttagcgcaagattttgtgaaagaagtggagttgacgggcgttgacgacattcgtgaatat
ctctaa
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