Tripterygium wilfordii (thunder duke vine): 120003904
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Entry
120003904 CDS
T07256
Name
(RefSeq) protein TSS-like
KO
K03255
protein TIF31
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
twl03012
]
120003904
Translation factors [BR:
twl03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
120003904
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_12
TPR_10
eIF3_p135
TPR_NPHP3
CLU_N
TPR_2
TPR_MalT
TPR_9
TPR_8
CLU
RNaseH_C
Motif
Other DBs
NCBI-GeneID:
120003904
NCBI-ProteinID:
XP_038708988
LinkDB
All DBs
Position
8:2333145..2350425
Genome browser
AA seq
1792 aa
AA seq
DB search
MAPKTSRGKGKGDKKKKEDKVLLPVVMDIAVDLPDETRVVLKGISTDRIIDVRRLLALNT
ETCHITSFSLSHEVRGQRLKDTVDVFALKPCVVTLTEEDYDEERAVSHVRRLLDIVACTT
CFGPAATKKDASKSDAAKNVPATQDKCAKKNTTKSQLATAATTISKQSNSKDVAVDGGGD
MSESFPKFGSFYDFFSLAHLTPPLQFIRRSTKRQVDEISAKDHLFSLEVKFCNGKLVHVE
VCRKGFLSIRKQRILCHNLVDLLRQLSRAFDNAYDDLMKAFSERNKFGNMPYGFRANTWL
VPPVAAQSPSTFHSLPMEDETWGGNGGGLGRDGKSDLTPWANELQFIASMPCKTTEERQI
RDRKAFLLHSLFVDVAIFRAVKAIQHLMGKSDLICSVANNETLYTERVGDLITMVMKDAS
NASIKSDTKIDGIQAIGLDKQILVERNLLKGITADENTAAHDIATLGFVYVRYCGYIASV
KVERQENIKVDSRYRSIDLEQPEGGANALNINSLRQLLHKVTTLEHAKPSLHFHCLEHED
DNTIRAFVERVLEESLAYLEKEEPKRERFVRWELGAGWIQHLQDQNNADKDKKSSAQKAK
KSSTEEERKVKGLRTPLKSLKNNKKLDASSMKMQSESPGTSVDGVIEEVEDATSASSESQ
FDTNANDNEHKLKRLLSDAAFSRLKESKTGLHCKSIQELAELAQKYYTEVALPKLVADFG
SLELSPVDGRTLTDFMHTRGLRMHSLGHVVKLSDKLSHVQSLCMHEMIIRAFKHILRAVI
AAVVNPDEMAMSIAAALNLMLGVPNNSKSDKSFYVHSLVWRWLEVFLRKRYEWDLSIFNY
KDVRKFAILRGLCHKMGIELVPRDFDMDSLHPFHKSDVVSLIPVHKQAACSSADGRQLLE
SSKTALDKGKLEDAVTYGTKALAKLVAVCGPYHRMTAGAYSLLAVVLYHTGDFNQATIYQ
QKALDINERELGLDHPDTMKSYGDLAVFYYRLQHMELALKYVKRALYLLHLTCGPSHPNT
AATYINVAMMEEGLGNAHIALRYLHKALKCNQRLLGPDHIQTAASYHAIAIALSLMEAYS
LSVQHEKTNLQILRAKLGPDDLRTQDAAAWLEYFESKAFEQQEAARNGTRKPDASIASKG
HLSVSDLLDYINPGHDAKGRDAVAVKRKNYITKVKGKSFQDVDLAHLDDTVKENSKNVSV
EEGDTSDMGSKSDANQASISTPVQSWQPAEEETVEERANIPKENFSEKHIEGDDGWQPVL
RPRSAGSYRRRVKQRRATIGKVYSYRKRIVDADMDYPPIKHLHQNSRYFLLKKRTITHGR
YADYHSANPSQGSKFGRRIVKSVTYRAKSVPSSNKSDTQEASRNDGKVLDSSLESSSVCS
SIVTLGKSPSYKEVALAPPGTIAKLQFGFSPSDIPDSQEVLAEKCEEEKQNPNSMGVEDM
SQKQCEDMPGPRNNLKEDVVVIEKKEKTELTDEIEDNCSVAASVSVKEFESAIIEIPEVM
QDCVSIDGIPKSIDSSMKELCEKDSSGSNEIHGDSNSSLPGEENLKDKPSVPYKGDGRGF
VNKKLSASAAPFNPSPAVACSEPVAMNIAIPSGHNAVQAVRPWPVYMTLHLGPVPILPTL
NPISPQHLHPSSPSTPSLIQSLPFIYPTYTQPQAVPTNTFPVTGSAFHPNHFPWQCNVNP
STSEFIPSTPWPGCHPMEFSITPPVVRPVADPGLEPKLELNDCESLSHAPILPVDVESVG
EATKEVNPLSSDAVNNASENAKVTTESVEENVDSNLCADEAAGNEASAQNPK
NT seq
5379 nt
NT seq
+upstream
nt +downstream
nt
atggcgcctaaaaccagtcgcggaaaggggaaaggagataagaagaagaaggaagataaa
gttcttcttccggttgtcatggacattgcagtagaccttcctgacgaaacccgggttgtt
ttgaagggaatatcaacggataggattattgatgtacgccgactgctcgcactcaacact
gaaacttgccatatcactagtttttcattatcgcacgaggtgagaggacaacggttaaaa
gacacggtggacgtcttcgcactgaagccatgcgtcgtcacattaacggaagaggattac
gatgaagagcgcgcggtgtcgcacgttcgacggcttctggacattgtcgcctgtacgacc
tgctttgggccggcagcgacgaagaaggacgcctcgaagtccgacgccgccaagaatgtg
ccggctacgcaggacaagtgcgccaagaaaaataccaccaaatctcaactcgccaccgcc
gccactactattagtaagcaatcgaactcgaaggatgtggccgtggatggaggcggagat
atgagcgaatcttttcccaagtttggtagcttctacgatttcttctctctcgcccacctg
actcctcctcttcaatttataaggaggtcgacgaaacggcaagtggacgagatttcagct
aaggatcatcttttctctcttgaagtgaaattctgcaatggaaagctggttcatgttgag
gtttgcagaaaggggtttcttagcatccgaaagcagcggattctatgtcataaccttgtt
gatttgttacgccagctcagtagagcctttgacaatgcttatgatgatctcatgaaagcg
ttctcagaacgcaacaagtttggcaatatgccttatggttttagagccaacacatggctt
gtccctcctgttgcagcacagtcaccatcaacatttcattctctgcccatggaggatgaa
acctggggtggaaatggaggtggtctgggaagagatggtaaaagcgatttgacaccttgg
gctaatgaactacaatttattgcatctatgccttgcaagacgacagaggagagacaaatt
cgagacaggaaagctttccttcttcacagtttgtttgttgatgttgccatcttcagagct
gtcaaggctattcagcatttaatgggaaaatcagatttgatttgttctgtcgccaacaac
gaaactctttacacagagagagttggggacttgatcaccatggtcatgaaagatgcttca
aatgcaagcattaaatcagacacaaaaattgatggcatccaagcaattggactggacaaa
caaattctggtagaacgaaatctgctgaaagggataactgcggatgaaaatactgcagcc
catgatattgctactcttggttttgtatacgtaagatactgtggttacattgcttctgtg
aaagttgagaggcaagagaacattaaagttgattcccggtatcggagcattgatcttgaa
cagcctgaaggcggtgccaatgcccttaatattaacagtttaagacaactgcttcacaag
gtgacaactctggaacacgctaaaccatcattacatttccattgtttggaacatgaagat
gacaatactatccgggcttttgtcgaaagagtgctggaagaaagtttagcctatcttgaa
aaagaggagccaaaaagagagcgatttgtcagatgggaacttggagccggctggatacag
catttgcaagaccagaataatgcagataaagataagaaatcatctgcacagaaggctaag
aaatcatccacagaggaagagaggaaggttaaggggcttcgtacaccactgaagtccctc
aagaacaacaagaagcttgatgcaagcagtatgaaaatgcagtctgaaagcccaggaacc
agtgtggacggtgttattgaggaagttgaagatgctacttcagcttcttcagaatctcaa
tttgatacgaatgcgaatgacaatgagcacaaactcaagaggttgttatctgatgcagcc
ttttctcgactaaaagaatcgaaaacaggacttcattgcaagtctatacaagaactagcc
gaattggcgcaaaagtattatactgaagttgctcttccaaaactggtagcagactttggt
tcgttggaactgtcaccagttgatgggcgaactctaactgatttcatgcatactagaggc
cttcggatgcattccttgggacacgttgtcaagctttcagataagctatcacatgtacag
tcactgtgtatgcatgagatgataatacgagcctttaaacacattcttagggcagtgatt
gctgctgttgtaaaccccgatgaaatggcaatgtcaatagctgctgcattgaacttgatg
cttggagttcctaacaacagcaaatcagacaagtctttctatgtgcattcccttgtgtgg
agatggctggaggtattcttgagaaagcgatatgaatgggatcttagcatctttaactac
aaagatgtgagaaaatttgcaattctacgtgggttatgccataagatgggtattgagttg
gttccaagggattttgatatggattctctgcatccatttcataaatcagatgttgtcagc
ctgatcccagtgcacaagcaagccgcatgctcatctgcagacggaagacaactcttggaa
tcatcgaaaacagcattagataaagggaaattagaagatgcagtcacttatggaacgaag
gctcttgcaaagctggttgcagtttgtggcccctaccatcgaatgacagcaggagcatat
agcctccttgctgtagttttatatcacactggtgacttcaatcaggccaccatatatcaa
caaaaagccttagatatcaatgagagagagttaggactcgatcatcctgatacaatgaaa
agttatggtgatcttgctgtcttttattacagacttcaacatatggagctggctctcaag
tatgttaagcgtgctttgtatctattacatctcacatgcggcccatctcatccaaacact
gctgcaacatacataaatgttgctatgatggaggaaggcctggggaatgcacacattgcc
ctcagatatctccataaagctctgaaatgtaaccaaaggctacttggtccggatcatatt
cagacagcggcaagctaccatgcaatagcaattgctctctcattgatggaagcatactcc
ctgagcgttcagcatgaaaagacaaacctgcaaatcctccgagcaaagctgggccctgat
gatttgcgcacgcaggatgctgctgcttggcttgagtacttcgagtccaaagcttttgaa
caacaagaagctgcaagaaatggtactcggaagcctgatgcatctatagccagcaaaggc
catctgagtgtctcggatttgctggactacataaatccaggccacgatgccaaaggtaga
gatgctgtggcagtaaaaaggaaaaactatattacaaaggtgaaagggaaatccttccaa
gatgttgatttagcacatttagatgatactgtgaaagaaaactccaaaaatgtgtctgtg
gaagagggagatacatccgacatgggaagtaagtcagatgctaaccaggcgagcatctct
accccagtacagtcctggcagcctgctgaggaggaaactgtcgaggaaagggcaaatatt
cccaaggagaacttttctgaaaaacatattgaaggagatgatggatggcaaccagttctg
aggcctagatcagctggctcatataggcgacgagtaaagcagcgacgagcaaccattggc
aaggtttatagttatcgtaaaagaattgttgatgctgacatggactatcctccaatcaaa
catctgcaccagaatagcaggtatttccttttgaagaaaaggacgattacccatggaaga
tatgcagactatcacagtgcaaatccctctcaaggttccaaatttgggaggagaatagtc
aaatctgtaacataccgggctaagtctgtaccttcttctaataagagtgatacgcaagag
gcatctagaaatgatggcaaggttcttgattcttcattagagtcttcttcagtttgcagt
tcaattgttactcttggaaaatctccttcttataaggaagtagctttggccccaccaggt
actattgctaagttgcagtttgggttttctccaagtgacattccagatagccaggaagtt
ctagctgagaaatgtgaagaagaaaaacaaaatcccaactcaatgggagtagaagatatg
tctcaaaagcagtgtgaggatatgcctggtccgagaaataatttaaaagaagatgttgta
gtcattgaaaagaaagaaaaaactgaattgactgatgaaatagaagataattgttctgta
gcggcctctgtgagtgtgaaagaatttgagtctgcaattattgagattcctgaagtcatg
caggattgtgtatcaattgatggcatcccaaaatctattgattcttccatgaaggaactc
tgtgagaaggattcatctggaagcaatgaaattcatggtgactcaaactccagtttgcca
ggagaagagaatttgaaggacaaaccatcagttccgtacaaaggggatggtcgaggattt
gtcaataagaagttgtctgcttctgctgctccattcaacccatcaccagctgttgcatgt
tctgagccagttgcaatgaacattgcaattccttctggtcataacgctgttcaggctgtg
agaccttggccagtatatatgactcttcacctggggcctgttcctattttacctacactt
aatccgatatccccccagcatctgcacccatcatcaccttcaaccccgagcctcatacag
tcattgccctttatttaccctacatacacccaacctcaagcagtgccaaccaatactttt
cctgttactggcagtgcttttcatcccaatcatttcccttggcagtgcaatgtgaatccg
agtacatcagaatttataccgagcacaccttggcctggatgccatccaatggagttctct
atcacgcctcctgttgtcaggccagttgctgatcctggattggagccaaagttagaactt
aatgattgtgaaagcctgagtcatgccccaattctcccagtagatgttgagagcgtggga
gaagctactaaggaagttaatcctttatcatcagatgcagtaaataatgcaagtgaaaat
gctaaggtcactacagaaagtgtggaggaaaatgttgattcaaatctttgtgctgatgaa
gctgccgggaatgaagcatcagcacaaaatcccaaatga
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