Tripterygium wilfordii (thunder duke vine): 120003910
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Entry
120003910 CDS
T07256
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT5-like
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
120003910
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
twl04121
]
120003910
Enzymes [BR:
twl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120003910
Ubiquitin system [BR:
twl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
120003910
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_2
FAIM1
Motif
Other DBs
NCBI-GeneID:
120003910
NCBI-ProteinID:
XP_038708994
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Position
8:198219..201793
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AA seq
332 aa
AA seq
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MELESVSFSDGLDEDEIHHHSLHHPSHPHLHNLRQFSSSKPHNANVGNNGSIGGPTAIAP
VTSVHELLECPVCTNSMYPPIHQCHNGHTLCSTCKIRVHNRCPTCRQELGDIRCLALEKV
AESLELPCKYYSLGCPEIFPYYSKLKHEAICNFRPYNCPYAGSECSVTGDIPFLVSHLRD
DHKVDMHTGCTFNHRYVKSNPREVENATWMLTIFHSFGQYFCLHFEAFQLGMAPVYMAFL
RFMGDEAAARNYSYSLEVGANGRKVIWEGTPRSIRDSHRKVRDSHDGLIIQRNMALFFSG
GDRKELKLRVTGRIWKEQQNPDGGVCIPNLCK
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atggagttggagagtgtgtcattctcagatgggttggatgaggatgagatccatcaccac
agtctgcaccatccatcacatcctcatctccacaatctgcgccagttctcttcatcaaag
cctcacaatgccaacgtcggaaataatggcagtattgggggcccaacggcgatcgctccg
gtcaccagcgtccacgagttgctggaatgccctgtctgcaccaattccatgtacccaccc
attcatcagtgccacaatggtcacacactatgttccacctgcaaaataagagtacacaac
cgatgccccacttgcaggcaggagcttggagatattaggtgtttagcactggagaaggtg
gctgagtcacttgaattgccttgtaagtattacagcttgggatgcccagaaatatttccc
tattacagcaaacttaagcacgaagcaatatgcaactttaggccatataattgcccatat
gctggatcagagtgttccgtcaccggagatattcctttcttggtttctcatttgagggat
gaccacaaggttgacatgcacacaggatgtacattcaaccatcgttatgttaagtccaac
ccccgggaagtagagaatgcaacgtggatgctaactatcttccattcttttggtcaatac
ttctgccttcactttgaagcctttcagctggggatggcaccagtttacatggcatttctc
cgtttcatgggtgatgaggctgcggcgcggaattatagctacagcttagaggtgggggca
aatggcaggaaggttatatgggaaggtacaccaagaagtattcgggatagccaccggaag
gtcagagatagccacgatggtctcattatccagcgcaacatggcccttttcttctctggt
ggggataggaaagaactgaaattgagagttactgggagaatatggaaggagcagcagaat
ccagacggcggagtgtgcataccaaacctttgtaaatga
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