Tripterygium wilfordii (thunder duke vine): 120003935
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Entry
120003935 CDS
T07256
Name
(RefSeq) pinin-like
KO
K13114
pinin
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl03013
Nucleocytoplasmic transport
twl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
120003935
03015 mRNA surveillance pathway
120003935
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
twl03019
]
120003935
03041 Spliceosome [BR:
twl03041
]
120003935
Messenger RNA biogenesis [BR:
twl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
120003935
Spliceosome [BR:
twl03041
]
Complex C
Other components
EJC/TREX
120003935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pinin_SDK_memA
Motif
Other DBs
NCBI-GeneID:
120003935
NCBI-ProteinID:
XP_038709019
LinkDB
All DBs
Position
8:complement(3105466..3110078)
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AA seq
424 aa
AA seq
DB search
MGTVAVEKTAEELRKEIVELHRQQREITERLRDPRGLRRGGFSGAGPRNFAANGARQRGI
VRPADRTGVEDQPPAKRRLSSAVVKLEDGEIIEDTEAEKDVKHMDSTVEVSIGTGGAHGN
DSKPSNFRQTGWPMGDRNMRTAKNTEPSVMEHVPRILPKDEDPSLVSRNKRMLGRLLGTL
ERFRKEDMQLSGTEAYMRRSNSLQRAEQRAREESERLRLQEREQIEEKRKRDLTLRARIA
AKKEEKELELLFLEWSNHHNKLSNFIRTKTEPHIYYLPMKPLVEDVKLLEQQKEQVFSDW
KAARREELSQYQKQISEQYIANVEKELERWQNARNARNVKNDPSNLQETMDRELDTHRLE
HGPKTRKIPGGSDNEDEDDIEDINVGEDDMMDDVLDVDENRRVDETAKPQAGNTSPQQDD
NHQQ
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgggcaccgtcgcagtggagaagacagcggaggagctccgtaaagagatcgttgagctc
catcgccagcagcgagagattacggagcgactgcgggatcctcgtggtctccgaagagga
ggcttttcgggcgctggtcctcgcaactttgcggccaatggagcccgtcagcgtggcatt
gttcgcccggctgatagaactggagtggaagatcagcctccggcgaaacggcggctgtct
tcagctgtggttaagttggaggatggagagatcattgaagatacggaggcagaaaaggat
gtgaaacatatggattctactgttgaagtaagcattgggacaggtggagctcatgggaat
gacagcaaaccatctaatttcaggcagactggttggcccatgggggaccggaatatgaga
acagcaaagaatactgagccttcagtaatggagcatgtgccaagaattttgcccaaggat
gaagacccaagcttggttagtaggaataaaagaatgcttgggcgactattggggactttg
gagagattcaggaaagaagatatgcaactttctggtacagaggcatatatgcggaggtca
aattctttgcaaagagctgagcagagagctcgtgaagaaagtgaaaggctgaggctgcaa
gagcgtgaacaaattgaagaaaagaggaagagagatttgactctcagggcgcgtattgct
gcaaagaaagaagaaaaggagttggaattgctgtttcttgagtggagtaaccatcataat
aagcttagcaattttataaggactaagacggagcctcacatatattatttgcccatgaaa
ccactggttgaagatgtgaagttacttgagcagcagaaggaacaggtattttctgattgg
aaggctgctaggagagaggagctatctcaatatcagaaacagatcagtgaacaatacatt
gccaatgttgagaaggagttggagagatggcaaaatgcaaggaatgctaggaatgtgaaa
aatgatccctcgaatttacaggaaacaatggacagagaattggatacccataggcttgag
catggtcccaaaacaagaaagatccctggtggaagcgacaatgaagatgaggacgatata
gaagatataaatgttggggaggatgacatgatggatgatgtgcttgatgttgacgagaac
agaagggtcgatgaaactgctaagcctcaagctggtaataccagtccacagcaagatgat
aatcaccagcagtag
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