Tripterygium wilfordii (thunder duke vine): 120004007
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Entry
120004007 CDS
T07256
Name
(RefSeq) ABC transporter B family member 28
KO
K05657
ATP-binding cassette, subfamily B (MDR/TAP), member 10
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
120004007
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
twl02000
]
120004007
Transporters [BR:
twl02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB2, 3, 8, 9, 10 subgroups
120004007
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_21
AAA_29
AAA_22
AAA_5
AAA_16
AAA_30
AAA_15
AAA_25
RsgA_GTPase
AAA_23
AAA_28
AAA_33
nSTAND1
Rad17
Motif
Other DBs
NCBI-GeneID:
120004007
NCBI-ProteinID:
XP_038709130
LinkDB
All DBs
Position
8:888596..895925
Genome browser
AA seq
723 aa
AA seq
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MASATCPLLYLSSPTHLSDISCQALTKFKPPLASVTPSFHQSWRFPPNPTSCRRKWSTRT
RSVTVPRAYVTGPASDAMLSEPDPKIDDAVGRSVQVKSPDLISRELLWSLLLKHKLKLGI
STLTLIGCTTCTLSMPIFSGRFFEVLIGVRPEPLWRLLSKIGLLYALEPVFTVIFVITLN
TTWEKVMSTLRAHVFRRMLVQKVEFFDRYKVGELSGLITSDLGALKNIVSENISRDRGFR
ALSEVIGTICILFTLAPRLAPILGLLMLTVSVCVAVYKRSTVPVFKAHGQAQASISDSVT
ETFSAIRTVRSFGGEKRQMSMFGSLVLAYQSSGIKLGTFKSVNESLTRVAIYISLLALYC
LGGSKVKAGELSVGTMASFIGYTFTLTFAVQGLVNTFGDLRGTLSAIERINSAFSGVEVD
DALAYGLEKDIKEQDVNDDKIRLFFVDGYDGRNQNLNTHYMSALKSSSNIRRLAWSGNVH
LEDVHFSYPLRPDVEILNGLDLTINSGTVTALVGPSGSGKSTIVQLLARFYEPIKGRLTI
AGEDVRTFDKSEWARVVSIVNQEPVLFSISVGENIAYGLPDDYVSKDDIIKAAKAANAHE
FILSLPQGYDTLVGERGGLLSGGQRQRIAIARALLKNAPILILDEATSALDSVSERLVQD
ALSHLMKGRTTLVIAHRLSTVQNAHQIAVCFDGKIKELGTHFELLERKGLYDSLVGTQRL
AFE
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atggcttctgccacttgcccgcttctttacctctcgagtcccactcacttatctgatatt
tcctgtcaggcgctcaccaagttcaaaccgcctcttgcctctgtaactccttctttccac
caatcatggcgtttcccaccaaatccaacgtcttgcaggagaaaatggagcacccggact
cggagcgttacggttccgcgtgcgtacgtgacgggtcctgcgtcggacgcgatgttgagc
gagccggacccgaagatcgatgatgcggtgggcaggagcgtccaggtgaagtccccggat
ttgataagtcgggagcttctgtggagtttgttgcttaagcacaaattgaagctggggatt
tctactttgactctaattggttgcactacttgtactctctccatgcccatattttctggg
aggttttttgaagtactaataggagtgagaccggagcctttgtggaggctgcttagtaag
attggacttctctatgcattggagccagttttcacagtaatctttgtgataactttgaac
actacgtgggagaaggtcatgtcaacactaagagctcacgtttttaggcggatgcttgtg
cagaaggtggaattttttgacagatacaaggttggtgaacttagtggtctgataacatct
gacttgggggctctcaaaaatattgtcagtgagaacatttcaagggatcgtggatttcgg
gcactttccgaggtgattgggacaatatgcatactattcaccttagcgccccgacttgcg
ccaattctgggcctactgatgcttactgtttccgtgtgtgttgctgtatacaagagatcg
actgtgcctgtgtttaaagctcatggacaggctcaagcgtcgatatctgatagtgtaaca
gaaacattttctgctattcgtactgtcagatcatttggtggtgagaaaaggcagatgtct
atgtttggcagcctggttcttgcatatcagagtagtggcataaagctcgggaccttcaaa
tctgtgaatgaatcattgactagagttgctatatatatttctttgttggctctatattgc
ctcggaggaagcaaagtgaaggcaggggaactttctgttggaactatggcttcttttata
ggatacacattcacattaacctttgctgttcaaggtctggtcaacacatttggagacctc
cgtggaactctttccgctattgagaggattaattctgctttctctggtgttgaagttgat
gatgcccttgcttatggtttagaaaaagacatcaaggaacaagatgtgaatgatgacaaa
attagattgttttttgtcgatggttatgatgggagaaatcaaaatttgaatacgcactac
atgtcagccctgaaatcatctagtaatattcgtaggttagcctggtctggcaacgttcat
cttgaagatgtgcatttttcttatcctttgagacctgatgtggaaatcctgaatggtctt
gatttgacaataaattctggaactgtgactgctcttgtggggccaagtggttcaggcaag
agtacaatagtacagctgcttgcacgtttttatgagccaatcaaaggtcgtttaacaatt
gctggagaagatgtccgaacatttgataagagtgaatgggccagggttgtctccatagtt
aatcaagagcctgttctcttttcaatttctgtgggtgaaaatattgcatatgggcttcca
gatgattatgtctccaaggatgacattataaaggcagccaaagcagcaaatgctcatgaa
tttattctttcactaccacagggttacgacaccctagttggtgagcgtgggggcctccta
agtggaggacagaggcagagaatcgctatagcaagagccctgctaaagaatgccccgatc
ctaattcttgatgaggccaccagtgcattggattcagtcagtgagcgcctggtccaggat
gctctgagccatctaatgaagggcaggacaacattagtgattgctcatagattaagcaca
gttcaaaatgcacaccaaattgccgtttgttttgatgggaagatcaaagaactcggcaca
cattttgagttactagaaaggaagggtctatatgattcactggttggcacacaaaggctt
gcattcgagtga
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