Tripterygium wilfordii (thunder duke vine): 120004134
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Entry
120004134 CDS
T07256
Name
(RefSeq) general transcription and DNA repair factor IIH subunit TFB1-1-like isoform X1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl03022
Basal transcription factors
twl03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
120004134
09124 Replication and repair
03420 Nucleotide excision repair
120004134
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
twl03021
]
120004134
03400 DNA repair and recombination proteins [BR:
twl03400
]
120004134
Transcription machinery [BR:
twl03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
120004134
DNA repair and recombination proteins [BR:
twl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
120004134
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BSD
PH_TFIIH
Motif
Other DBs
NCBI-GeneID:
120004134
NCBI-ProteinID:
XP_038709322
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Position
8:4111092..4122070
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AA seq
599 aa
AA seq
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MASGSVVLRAKHKSTTKDPGTPGVLKLEEKFIFMPNNPQSASSKMNIDFQFIKAHKYTKD
GSNKPPWLNLSLDQGGSHIFEFDNYSDLHVCREYLSQALTKAVEASKPAPEKETPSVTTR
PEEQLSTAEMELRIKLLRENGELQRLHKQLVIGRVLTEAEFWANRKKLLDTDSRSKSKQR
VGFNSVMISDIKPSTDGRTNRVKFNLNREIIFQIFAEKPAVHRAFLNLVPNKMTEMDFWT
KYFRAGYLHSTKNTIAAAAEAAEDEELAIFLKQDDIVASEASKKIKQVHPTLDILATEAD
DYMHLPGHGILHDDSLHVTEQQDELYKRTLAQDLNRHASVVLEGRPIDVELDDARTLAEA
LAQSKQAYGKADTSKEKLNRIYPTTEIEDLQPPKDLPLAPLCIKDPRDYFDSQQASLLRT
SRDTLGGTEPLKCSLSTQDAYGSLRDSISNFKSVGLSIPIVNSEVAAKVFNALTHNISST
KYHMGKNPGGSVLDMLPNSTKEELLHQSTCIQELLKHFWSSYPITTSYLFNKVSRLKDAM
SQIYSQLEDMKKSVQSDLRHQVSLLVRPMQQALDAAIQHHDADLQKRSSRSVERPNGHT
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atggcgagtgggagtgttgttctgcgagcaaagcacaagtctaccacgaaagaccctggc
actcccggtgtcctaaaattggaagagaagtttatattcatgcctaataaccctcagtca
gcttcttcaaagatgaacatagattttcaattcattaaagctcataagtacactaaagat
ggatccaataaaccaccatggctcaatctatcccttgatcagggtggaagccacattttc
gaatttgataattactctgatctccatgtttgtcgagagtatttgagccaagccctcacg
aaggctgtagaggcttcaaaacctgctcctgagaaagaaacacctagtgttaccacacgt
cctgaagaacaactaagtacagcagaaatggaattaaggattaagctactgagggagaat
ggtgagttgcagaggcttcataagcaattggtgataggtcgtgttttgacagaagctgaa
ttttgggcgaatcgaaagaagttacttgacacagactcccgcagtaagtcaaaacaacga
gtagggtttaacagtgtaatgatttcggacatcaaaccatctactgatggccggacaaac
agggtcaagtttaatttgaatcgggagatcatatttcagatttttgcagagaaaccagca
gttcatcgggcatttttgaacttggttccaaataagatgacagaaatggatttctggacc
aaatattttagggctggatacctccacagtaccaaaaacaccatcgcagcagcagcagag
gctgctgaggatgaggagctcgctatttttttgaagcaggacgatatagttgctagcgaa
gcttcgaagaagatcaaacaggttcatccaactttggacatcctggctaccgaagcggat
gattacatgcaccttccaggtcatgggattttgcatgatgacagcttacatgtaactgaa
cagcaagatgaactgtacaaaagaactctagcgcaggatctcaaccggcatgcttctgtt
gttcttgagggaagacctatagatgtggagttggatgatgcacggaccctagcagaggct
cttgctcagtcaaagcaggcttatgggaaagctgatacaagcaaggaaaaattgaacaga
atctacccaacaacagaaatagaggatcttcaaccaccaaaagatcttcctttagcacca
ctttgcattaaggatcctagagactactttgattctcaacaagctagcctgctacgaact
tccagagatacactgggtggaactgaaccactgaaatgtagcttgagcactcaggacgcg
tatggatctctcagagactctatctctaacttcaagtctgtgggattgagtattcccata
gtgaattctgaagtcgctgcaaaggtgttcaatgcattgacccataatatctcaagtacc
aagtatcatatggggaaaaatcccggagggagtgttttagacatgttgccaaactcaact
aaggaggaactgcttcatcaatcgacgtgtattcaagagttactgaagcatttctggtca
tcatatcctataacaacttcgtatctatttaataaggtaagcagattgaaggatgctatg
tcccaaatatattcacagcttgaggatatgaagaaatctgtgcagtcagatctcaggcat
caggtttccctactagttcgtccaatgcagcaagcactagatgctgctatccaacaccat
gatgcagacttgcagaagagatcgtctcggagtgtagagagaccaaatggacacacttaa
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