KEGG   Tripterygium wilfordii (thunder duke vine): 120004156
Entry
120004156         CDS       T07256                                 
Name
(RefSeq) WD-40 repeat-containing protein MSI1-like
  KO
K10752  histone-binding protein RBBP4
Organism
twl  Tripterygium wilfordii (thunder duke vine)
Pathway
twl03082  ATP-dependent chromatin remodeling
twl03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:twl00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    120004156
   03083 Polycomb repressive complex
    120004156
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:twl03036]
    120004156
Chromosome and associated proteins [BR:twl03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    CAF-1
     120004156
  Histone modification proteins
   HAT complexes
    HATB complex
     120004156
   HDAC complexes
    Sin3A-HDAC complex
     120004156
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     120004156
    PRC2.2
     120004156
  Centromeric chromatin formation proteins
   Kinetochore proteins
    MIS16-MIS18 complex
     120004156
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    120004156
  Chromatin remodeling factors
   NuRD complex
    120004156
   NuRF complex
    120004156
   NuRF complex (fruit fly)
    120004156
SSDB
Motif
Pfam: CAF1C_H4-bd WD40 WD40_CDC20-Fz WD40_Prp19 Beta-prop_CAF1B_HIR1 Beta-prop_EIPR1 Beta-prop_RIG_2nd WD40_WDHD1_1st WDR55 Beta-prop_EML_2 Beta-prop_TEP1_2nd WD40_RFWD3 Beta-prop_WDR75_1st EIF3I Beta-prop_EML Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 WD40_MABP1-WDR62_2nd WD_LRWD1 Beta-prop_RIG_1st eIF2A NBCH_WD40 WD40_MABP1-WDR62_1st
Other DBs
NCBI-GeneID: 120004156
NCBI-ProteinID: XP_038709352
LinkDB
Position
8:11002132..11004816
AA seq 424 aa
MGKDEEEMRGEIEERLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKD
YSVQKMILGTHTSDNEPNYLMLAQVQLPLDDAENDARHYEADRSDVGGFGAANGKVQIIQ
QINHDGEVNRARYMPQNPFIIATKTIGAEVFVFDYSKHPSKPPLDGACNPDLRLRGHTTE
GYGLSWSKFKHGHLLSGSDDAQICLWDINATPKNKALDATQIFKVHEGVVEDVAWHLRHE
YLFGSVGDDQYMHIWDLRIPSVTKPVQSVVAHQSEVNCLAFNPFNEWVVATGSTDKTVKL
FDLRKIGTALHTFDCHKEEVFQVGWNPKNETILSSCCLGRRLMVWDLSRIDEEQTPEDAE
DGPPELLFIHGGHTSKISDFSWNPCEDWVIASVAEDNILQIWQMAENIYHDEDDIPGDDT
TKGS
NT seq 1275 nt   +upstreamnt  +downstreamnt
atggggaaagacgaggaggagatgaggggagagattgaggagagactgatcaacgaagag
tacaaaatctggaaaaagaacactcctttcctctacgatttggtcatcactcatgcccta
gagtggccctctctcactgtcgaatggcttcccgaccgggaggagccgccggggaaggac
tactccgtccagaagatgattcttggtactcacacctccgataacgagcccaattacctc
atgcttgcccaggtccagctccctctcgatgatgccgagaacgatgctcgccactacgaa
gctgaccgctccgacgttggcggattcggtgccgccaacggaaaagtccagattatacag
cagatcaaccacgacggcgaggtcaatcgcgctaggtatatgccgcagaacccctttatt
atcgctaccaaaaccatcggtgcagaagtgtttgtctttgactacagcaagcatccctct
aaaccccctcttgacggcgcgtgcaaccccgacctgcggctcaggggtcacaccacagag
ggttacgggttgtcttggagcaagttcaagcacgggcatttgcttagcggttctgatgat
gcccaaatctgtctatgggatatcaacgccactcccaagaacaaggccctcgatgctacg
cagatattcaaggtccacgagggtgttgttgaggatgtggcctggcatcttaggcatgaa
tacctgtttggttctgtaggggatgaccaatacatgcatatatgggatctccgcattccg
tcggttaccaagcctgtccagtccgtagttgctcaccagagtgaggttaactgcttagct
tttaatccattcaatgaatgggttgtggcaacggggtctactgataagactgttaagtta
tttgatctacgcaagatcggcactgcactccacacgtttgattgtcacaaggaggaagtt
ttccaagtggggtggaatccgaagaatgagactattctttcttcttgttgccttgggaga
aggcttatggtgtgggatcttagcagaattgatgaggaacaaacaccagaggatgctgaa
gatggtccccccgagttgctcttcattcatggtggtcacactagtaaaatatcggatttt
tcgtggaatccttgtgaggattgggtcatcgctagtgtggctgaagataacatccttcaa
atatggcagatggcagagaatatctatcatgatgaagatgatataccaggagatgacacc
accaaaggttcttaa

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