Tripterygium wilfordii (thunder duke vine): 120004327
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Entry
120004327 CDS
T07256
Name
(RefSeq) ATP-dependent DNA helicase 2 subunit KU80
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
120004327
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
twl03400
]
120004327
DNA repair and recombination proteins [BR:
twl03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
120004327
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ku
Ku_PK_bind
Ku_N
Ku_C
Motif
Other DBs
NCBI-GeneID:
120004327
NCBI-ProteinID:
XP_038709570
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All DBs
Position
8:complement(11633118..11640035)
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AA seq
692 aa
AA seq
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MARNREGMVLLLDVGPTMHNFLPEVEKVCSMLIEKKLIYNKNDEVGVIVFGTEETKNELT
EEVGGYQHVVVLRDIKVVDGDLIKAFQPLPRGTVSGDYLDAIVVGMDMLIKKYGETFKGK
KRLCLITDALCPIKDPFEGTKEDQVSTIAIQMTAHGMRMESIIVRGGSNAEADKRIMDEN
DILLNVFPMKTSAKTVYVESATSLLGALRTRNISPVTIFRGDLEISAKLKIKVWVYKKTS
EEKFPTLKKYSDKAPPTDKFSTHEVKVDYEYKSVEDPSKVVPPEQRIKGYRYGPQVVPIS
AEEWEAVKFKPEKGVKVLGFTDASNIMRHYYMKDVNFFIAEPGNARATLAVSALARAMKG
MNKVAILRCVWRQNQGNVVLGILTPNVSDRGNIPDSFYFNVLPFTEDFREYHFPSFSNFP
PSLQPSEQQQEAADNLVQMLDLAPPERQEALLPDFTPNPVLERFYRHLELKSKHPDAAVP
PLDGTLKKITEPDPVLFSENKPKIDSFCRSFELKENPKLKKSNRRILRERPSLSDEGDGY
GNVSDAQDVTSIESKPVIKVEKVGDLTPVQDFEALMSRRDSPHWVGKAIKEMRNKIFNLV
EDSYEGDNYAKALEYLVALRKGCSLEQEPKQFNDFMLHLHKFCKEKYLSSFLEFLASKEV
TLISKAEAIDSDFTEEAAKNFLVEAEPHKNEG
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atggctcgaaaccgggaaggaatggtattgttgctcgatgttggtccaacaatgcacaat
tttcttccggaggttgaaaaggtttgctccatgctaatagagaagaagctgatatataac
aaaaatgatgaagttggggttattgtgtttggaactgaagagactaaaaatgaattgaca
gaggaggtgggtggatatcagcatgttgtggttttacgagatattaaagttgttgacgga
gatcttatcaaagcttttcaacctctcccacgtggaacagtttctggtgattatctcgat
gctattgttgttgggatggatatgctgattaaaaaatatggagagacattcaaaggaaag
aaacggctttgtcttattaccgatgccctttgtccaattaaagatccatttgaaggaact
aaagaagatcaagtgagtaccattgctatacaaatgactgcacatggtatgagaatggag
agcattattgtgcgggggggatcaaatgcagaggcagataagagaataatggatgagaat
gatattctgttaaatgtatttcctatgaaaacaagtgcaaagacagtgtacgttgagagt
gcaacttcattgttaggagcacttagaacccgcaatatatctccggtcacaatattcagg
ggtgatcttgaaatcagtgccaaattgaaaatcaaggtatgggtctataagaaaacatca
gaggagaagtttcctaccctgaagaaatattctgataaagcacctccaactgataaattt
tccacgcatgaagttaaagtagattatgagtataaaagtgttgaagatcctagtaaagtt
gtacctccagaacaaagaattaaaggttaccgttatgggccccaagtagttcctatatca
gccgaagaatgggaggctgttaagttcaaaccagaaaaaggtgtgaaagttctaggattc
actgatgcttcaaacataatgcggcactattacatgaaagatgttaacttttttattgct
gaaccgggaaatgcgagggctactcttgcagtttcagcattagcgagagcaatgaagggt
atgaataaggttgcaattctacgatgtgtgtggagacaaaatcaggggaatgttgttctg
ggcattttgacacctaatgtatctgacagaggcaacattcctgattcattttacttcaat
gtacttcccttcaccgaggatttccgggaatatcatttcccatctttcagcaatttcccc
ccatcattgcagccaagtgagcaacaacaggaggcagctgataacttagtacagatgctt
gaccttgcaccacctgagagacaggaagctttgttgcctgactttacaccaaatcctgtt
ttggagcggttttaccgtcatcttgagttaaagtcaaagcatccagatgcagctgtgcct
cctcttgatggaactctcaagaagataacagaacctgatcctgtacttttttctgagaat
aaacccaagattgattcattttgtcgaagctttgaactcaaggaaaatccaaagcttaaa
aaatcaaataggagaatattgcgagagagaccatctttgtctgatgagggagatggctat
ggaaatgtttctgatgctcaagatgtgacctctattgaaagcaaacctgttattaaagtt
gaaaaggtgggggatttgacccctgtacaagattttgaggccttgatgtcccgtagagac
agtccacactgggttggtaaagcaattaaggaaatgagaaataaaatatttaacctagtg
gaggactcttacgaaggggataattacgctaaagcactggaatatttagttgctcttcgc
aagggttgctcccttgagcaggaaccaaaacagttcaatgatttcatgcttcatctgcac
aaattctgcaaggagaaatacctcagcagtttcttagaatttcttgcctccaaagaagtg
acattgatatccaaggcagaagccattgacagtgattttacagaagaagcagctaaaaac
ttcctggtggaagcggagccacacaagaacgagggctga
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