Tripterygium wilfordii (thunder duke vine): 120004356
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Entry
120004356 CDS
T07256
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1-like
KO
K14485
transport inhibitor response 1
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
120004356
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
twl04121
]
120004356
Ubiquitin system [BR:
twl04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
120004356
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GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
F-box-like
LRR_4
LRR_NXF1-5
F-box
LRR_At1g61320_AtMIF1
Motif
Other DBs
NCBI-GeneID:
120004356
NCBI-ProteinID:
XP_038709613
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Position
8:complement(10336892..10341128)
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AA seq
584 aa
AA seq
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MLRMANSFPEEALEHVFSFIQSDKDRNSVCLVCKSWYETERWCRKRVFVGNCYAVSPGIV
IRRFPDVRSIELKGKPHFADFNLVPDGWGAYGYPWIAAMGSAYPFLEEIRLKRMVVTDEA
LELIAKSFKNFKVLVLSSCEGFSTDGLAAIAANCRNLRELDLQESEVDDLSGHWLNHFPD
TFTSLVSLNISCLGSEVNLSALERLVGRCPNLKTLRLNRAVPLERLSSLLTRAPRLVEFG
TGTCSTEVRSDVFSNLAGTFSRCKELKSLSGFWDVLPTHLPAFYPVCCGLTSLNLSYATI
QSPDLIKLISQCLSLQRLLVLDYIEDAGLEALASCCKDLRELRVFPSDPFVDVPNVSLTE
QGLVSISYGCTKLESVLYFCRQMTNTALVTIARNRPNMTRFRLCIIEPRTPDYLTLDPLD
VGFGAIVEHCKDLRRLSLSGLLTDRVFEYIGTYAKKLEMLSVAFAGDSDLGLHHVLSGCE
SLRKLEIRDCPFGDKALLANAGKLETMRSLWISSCSVSFGACKLLGQKMPRLNVEVIDER
EAPDSRPEGCPVEKLYIYRTVAGPRLDMPGFVWTMDEDSSLRLS
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgttgagaatggcgaattcgtttccggaggaggcgctagaacatgtgttctcgtttata
cagtcggacaaggataggaattcggtgtgtttggtgtgtaagtcgtggtacgagacagag
agatggtgtaggaagagggttttcgtcggaaactgctacgcggtgagcccaggaattgta
atcaggcgattcccggatgttagatcgatagagcttaaggggaagccgcactttgcggac
ttcaatctggtaccggacggctggggagcctacggttacccctggatcgccgccatgggc
tccgcctacccattcctcgaggagatcaggctcaagcggatggtggttaccgatgaggcc
cttgaactcattgcgaagtcctttaagaatttcaaagttcttgtcctttcctcttgtgag
ggattctctactgatggtctcgcggccattgctgccaattgcaggaatttgagagagttg
gacttgcaagagagtgaggtggatgatcttagtggccactggttgaaccattttcctgat
acattcacgtcactggtgtctcttaacatttcgtgtttaggctctgaggtaaacctttca
gccttagagcgactggtcggtcggtgcccaaacttgaagaccctcaggctcaaccgtgca
gtgccacttgagaggctctcaagcttgcttacacgggctcctcggctggttgagtttggc
acaggtacatgctcaactgaggtgcggtctgatgtgttctctaacctggcagggactttc
tctagatgcaaggaattaaagagcctttctgggttttgggatgttctccctactcatctg
ccggctttttatcctgtttgctgtggtctaacatcgttgaatttgagctatgccacaatt
caaagccctgatcttatcaagctcattagccaatgtctgagtttgcagcgcctattggta
ctcgactacattgaagatgctggacttgaggctcttgcatcatgttgcaaggacctgcgt
gaactgcgggtgttcccttcggacccatttgttgatgtcccaaacgtatccttgacggaa
cagggacttgtatccatttcctatggctgcaccaagctcgagtcagttctctacttctgc
cgccaaatgactaatacggcattggttaccattgccagaaaccgtccaaacatgacacgt
tttcgtctttgtattattgaaccacgtacaccggattacctaacacttgacccgcttgat
gtgggttttggtgctattgttgagcattgcaaagatctccggcgtctttccctctcaggt
cttcttacagatcgtgtgtttgagtatattgggacatatgctaaaaagctggaaatgctc
tctgtggcctttgcaggagatagtgacttgggactccatcatgtgttatctggatgtgaa
agcctccggaaactagaaatacgggactgtccttttggtgacaaggctctcttggccaat
gctggaaagctggagacaatgcgatccctttggatatcgtcttgctcagtaagttttgga
gcatgtaagttactaggtcaaaagatgcctagacttaatgttgaagttattgatgagagg
gaagctccagattccagacctgagggctgccctgtagagaagctttatatttataggact
gtcgctgggccgaggttagacatgcccggttttgtttggacgatggatgaagattcttca
ttgaggctttcttga
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