Tripterygium wilfordii (thunder duke vine): 120004489
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Entry
120004489 CDS
T07256
Name
(RefSeq) RNA polymerase sigma factor sigE, chloroplastic/mitochondrial-like
KO
K03093
RNA polymerase sigma-I factor
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
twl03021
]
120004489
Transcription machinery [BR:
twl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
120004489
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r4
Sigma70_r2
T5orf172
GerE
HTH_11
Motif
Other DBs
NCBI-GeneID:
120004489
NCBI-ProteinID:
XP_038709775
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Position
8:complement(347864..350808)
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AA seq
513 aa
AA seq
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MGVVTVSSSAARTPLGLSTKVSTSRFSMKRPSVVAFKADKSDNTTLIASNEQIPLHIERP
KEHQKKVGRSSKPTKRVKSISANEVSPNSWEVDYNEAAAKLESIYKLCPTVETSDLEHVD
GVKRRGRRRKKSGEDDIVVVRTSKIVVRSRERKAKRLDLDKRIALGKRKEELVEAIASVR
KRKDGKDEPEKIEQLVRGYSGATELGSLDWKRMKIPPVLPSTEHVWLFKLMQPMKALFKG
KEGLGPTFGREPTEGELAEATNMSVFQLRKQIEVGQAARNKLIKHNLRLVLFVMNKYFQD
LANGSKFQDLCQAGVTGLITTIDRFEPGRKLRLSTYGLFWIRHTIIRSMTLSSFQRVSFG
LQSVRLEIQRAKLELLIELQREPTEEEIIKKVGISPKRYREVIRASKAVLSLHSRHATTQ
EEFINGITDFEGDNQRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGNRTLGEIAGN
LNISREMVRKYEVKALMKLKHPTRVQYLCRYIV
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgggagttgtgactgtttctagctcagctgctcggacaccactaggattgagcaccaaa
gtttcgactagtcgcttctcaatgaaaaggccttcggttgttgcatttaaagctgataaa
tccgataacaccaccctgatagcgtcaaatgagcaaattccgttgcacatagaaagacct
aaagagcatcaaaagaaagtaggacgatctagcaaacctacaaaaagggtaaaatcaatc
tctgccaatgaagtttctccgaatagctgggaagtggactacaatgaggccgctgccaaa
cttgaaagtatttacaagctttgccccacagttgaaacttctgacctggaacatgttgat
ggtgtgaagaggagaggccgtaggagaaagaagagcggtgaagatgacatagtggtcgtc
agaactagtaaaatcgttgtcaggagccgggaaaggaaggcaaagcgattggatcttgat
aaaaggattgcattgggaaagaggaaagaagagttagtggaggcaattgcttcagttcgg
aagagaaaagatggtaaggacgaacctgagaagattgaacagctggtaagggggtattcc
ggtgcaactgagttgggaagcttggactggaagaggatgaaaatacctcctgttcttcct
tccactgagcatgtttggttgttcaagttgatgcaacctatgaaggcactctttaaaggg
aaagaggggttgggaccaacgttcggaagagaaccaactgaaggtgaattagctgaggca
acaaatatgagtgttttccaactaagaaaacagatagaggtcggtcaagctgcaagaaac
aaactcattaagcacaacctccggcttgtattatttgttatgaacaaatattttcaggac
cttgcaaatggctccaaatttcaagacctttgtcaggcaggagtgacggggcttattaca
acaattgatcgctttgaaccggggagaaagttgcggctgtccacttatggattgttttgg
ataaggcacacgattattcgttcgatgacgctctcaagctttcagcgcgtctcatttggc
cttcaatctgttagacttgagatccagagagctaaacttgagctgttgattgagctccaa
agagaaccaacggaggaagaaataatcaagaaagtagggatttcgcctaagaggtaccga
gaagtgattagggcatcaaaagctgtcctctctcttcattcaaggcatgccactacccaa
gaagagtttatcaatggaattactgactttgaaggggataatcaaagacaacctgctctt
ctcaggcttgctcttgatgatgtgctcgattctctgaagccaaaggagagcttggtgatc
agacagagatatggtcttgatggtaaaggcaacagaacattgggagagattgcggggaac
ctaaacatctcgcgagaaatggttcggaagtatgaggttaaggcactgatgaaactcaag
catcctactagagtgcaatatctctgccgatacattgtctga
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