Tripterygium wilfordii (thunder duke vine): 120004529
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Entry
120004529 CDS
T07256
Name
(RefSeq) putative E3 ubiquitin-protein ligase RING1a isoform X1
KO
K10695
E3 ubiquitin-protein ligase RNF1/2 [EC:
2.3.2.27
]
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
120004529
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
twl04121
]
120004529
03036 Chromosome and associated proteins [BR:
twl03036
]
120004529
Enzymes [BR:
twl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120004529
Ubiquitin system [BR:
twl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
120004529
Chromosome and associated proteins [BR:
twl03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
120004529
Noncanonical PRC1 (PRC1.1)
120004529
Noncanonical PRC1 (PRC1.3/1.5)
120004529
Noncanonical PRC1 (PRC1.6)
120004529
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-RING_5
zf-RING_UBOX
zf-C3HC4_3
zf-C3HC4_4
zf-RING_4
zf-UDP
zf-RING_6
zf-rbx1
zf-RING_10
zf-Nse
Ubl_WDR48-Bun107
Motif
Other DBs
NCBI-GeneID:
120004529
NCBI-ProteinID:
XP_038709820
LinkDB
All DBs
Position
8:complement(9735370..9741864)
Genome browser
AA seq
474 aa
AA seq
DB search
MPAHKRPLLPDNLSNEDPEQENHQQHSKQSQPEDPELEEKPQEREEEEEEEEEGEADRVE
ELEEEGAESEAESESSSSEEKPEFVYVELPDIRKDVQCPICLGIIRKTRTVMECLHRFCR
ECIDKSMRLGNNECPACRTHCASRRSLRDDPNFDALIAVLYPDIDKYEQQEFAFQEEDEN
RNKQIQASIAEIFQRQSEALVRKRPLGKEAGGPLMTRPQRSTRTLFSRRRRNTRGAEPQA
SEDNEDGNEDNGGKDSSSADEHSVSVEIRPRRRKRRTAPRSFHPTSSAIKPDGGGAENDL
IGNREKRGPSPGLVWNTEMLAWGRGGLRSNTRHGNAGGGNNRNSQSNRLSKLVEHLRGTE
ENDDELNVHLMLVSLDKQSMPSLQRPYLCCRPSVSVKQLCDYVAHRTELQSEEVEILVKG
YLSDGENRSTPNPSSSIDDEMKVLEGKDTLVKIKDKWPYSRHGLVLTYRQKASS
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgcctgcgcacaagcggcctctgcttccagacaatctaagcaatgaagaccccgaacaa
gaaaaccaccagcagcatagcaagcaatcacaacctgaagatccagaacttgaagagaag
ccacaggaacgggaagaagaggaggaggaggaggaggagggagaggcagaccgagtggaa
gaacttgaagaagaaggagcagagtctgaagctgagagtgaatcttcaagttctgaagaa
aaaccagaatttgtctatgtggagctgccagacattcgtaaagatgtgcaatgccccatt
tgtcttgggatcataaggaaaacacgaactgtgatggagtgcctgcaccgcttttgcagg
gaatgcattgacaagtcaatgcggttggggaacaatgagtgtcctgcttgccgcacgcat
tgtgcaagccggcgttctttgagagatgatccaaattttgatgccctaattgcagttttg
tatcctgatatcgataaatatgagcagcaggaatttgctttccaagaggaggatgagaac
cgaaataagcagattcaagcttcaattgctgaaatatttcaacggcaatcagaagcactg
gttagaaaacgcccactgggtaaagaagcaggaggtcctttgatgacaaggccacaacgt
agtactcggactttattttcaagaaggagacggaacactagaggcgctgagcctcaggcc
tctgaagataatgaggatggaaatgaagataatggaggcaaggattcatcttccgctgat
gagcactcagtctccgtcgaaataaggccgagaaggcgcaagagaaggactgcaccgcgg
tctttccacccgacttcatcagcaatcaaaccagatggcgggggtgctgaaaatgattta
atagggaacagggagaaaaggggaccatctcctgggcttgtgtggaacacagaaatgctt
gcttggggcagaggtggtcttagaagtaacacacggcatggaaatgctggtggcggcaac
aatagaaattctcaaagcaatcgcttgtcgaagctcgtggaacatctccggggcactgag
gaaaatgatgatgagttaaatgttcatctcatgcttgtttctttggacaaacaaagtatg
ccaagtttgcaacggccatacctttgctgtcgaccaagcgtgtcagttaaacaactatgt
gattatgttgctcaccgaacagaactgcagtctgaagaagttgaaatattagtaaaaggg
tatctaagtgatggtgagaaccgatccactccaaatccttcgagctccattgatgatgag
atgaaagttttggaggggaaagatacgttggtaaagattaaagacaagtggccatacagt
aggcatggtttggttcttacatatcgccagaaagcgagtagttag
DBGET
integrated database retrieval system
