Tripterygium wilfordii (thunder duke vine): 120004581
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Entry
120004581 CDS
T07256
Name
(RefSeq) oligouridylate-binding protein 1B-like isoform X1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
twl03019
]
120004581
03041 Spliceosome [BR:
twl03041
]
120004581
Messenger RNA biogenesis [BR:
twl03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
120004581
Spliceosome [BR:
twl03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
120004581
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_5
RRM_DEAH11
Motif
Other DBs
NCBI-GeneID:
120004581
NCBI-ProteinID:
XP_038709875
LinkDB
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Position
8:2436179..2443254
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AA seq
419 aa
AA seq
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MRHQRLKQQQQQALMQQALLQQQSIYHPGLLAPPQIEPIPSGNLPPGFDPSTCRSVYVGN
IHTQVTEPLLQEVFASTGPVEGGKLIRKEKSSYGFIHYFDRRSAAMAILSLNGRHLFGQP
IKVNWAYASGQREDTSSHHNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQNTGHSR
GFGFVSFRSQQDAQSAINDLTGKWLGSRQIRCNWATKGAEDEQSSDAKSVVELMNDSSED
GKETINNEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHAIGAGVIEEVRVQRDKGFGFVR
YSTHAEAGLAIQMGNTQSILWGKPIKCSWGSMPTPPGTSSNPLPPPAAAPMPGISATDLL
AYEQQLAMRKMVGVHAPMHPKGQHPLKQAAMGMSGGASQAIYDGGYQSVAAAQQLMYYY
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgcggcaccagaggctgaagcagcagcagcaacaggccttgatgcaacaagccctcttg
caacagcagtccatctatcaccctggcctcctcgctcctcctcagatagagccaattcca
agtggaaatctgcctcctggttttgatccaagtacttgtcgcagtgtgtatgtgggaaat
attcatacacaagtgactgaaccacttctccaagaggtttttgctagtactggtcctgtt
gaagggggaaagcttattagaaaggaaaagtcgtcctacggatttattcactactttgat
cgcagatcggctgctatggctattctgtctctcaatggaaggcatttatttgggcaaccg
atcaaggttaattgggcatatgccagcggtcagagggaagatacatcaagtcaccataac
atttttgttggagatctcagccccgaggttactgacgcgacattatttgcttgcttttct
gtttatcccagttgttcagatgcgagggttatgtgggatcagaatacagggcattcaaga
ggcttcgggtttgtttcttttcgaagtcaacaggatgcccagagtgcaataaatgacttg
actggaaaatggcttggcagtaggcagattcgatgtaattgggcaacaaaaggagctgaa
gacgagcaaagctctgatgctaaaagtgtggtggaactaatgaatgactcatcagaagat
gggaaggagacgataaacaacgaagctccggaaaacaatcctcaatatactactgtttat
gtcggcaatcttgctccagaggtaacgcagcttgatctgcatcgccacttccatgctatt
ggggctggagtgattgaggaggtcagggttcagcgtgacaaagggtttggttttgttaga
tacagtactcatgctgaggcaggtctggctattcaaatgggcaacacccagtcaattctt
tggggaaagccaatcaagtgttcctggggtagcatgcccactccaccaggcacaagttca
aacccactacccccgcccgctgcagcacctatgccaggcatctccgcaactgacctcttg
gcctatgagcagcagctggcaatgcgcaagatggttggtgtccatgctccgatgcaccct
aagggacagcatcccctgaagcaagccgcaatgggaatgagtggtggagccagccaggca
atatatgatggtggttaccaaagcgttgccgctgcccagcaactcatgtactactattga
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