Tripterygium wilfordii (thunder duke vine): 120004621
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Entry
120004621 CDS
T07256
Name
(RefSeq) SWI/SNF complex subunit SWI3A-like
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
120004621
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
twl03021
]
120004621
03036 Chromosome and associated proteins [BR:
twl03036
]
120004621
Transcription machinery [BR:
twl03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
120004621
Chromosome and associated proteins [BR:
twl03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
120004621
PBAF complex
120004621
GBAF(ncBAF) complex
120004621
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM
SWIRM-assoc_1
Myb_DNA-binding
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
120004621
NCBI-ProteinID:
XP_038709924
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All DBs
Position
8:1630887..1634789
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AA seq
555 aa
AA seq
DB search
METTHTNLNLKPVRPGEPELDLYTIPIQSSWFAWDDIHETEKVALREFFDGSSISRTPRI
YKEYRDFIINKYREDSSRRLTFTEVRKSLVADVSLLNKVFKFLEQWGLINFGVSIGNDGD
PVMEVEERGRVRVEDGTPNGVRVVAMPNSLKPISVPRSVEGRQVVDNIQKLPPLASYADT
FGDLVKRKGLVCRNCGECCGSGCYEGTKDHYMICTKCFNNGNFGENKSVDDFKFINCSEN
SGDNKVAWTEAETLLLLESVLKHGDNWELVAQNVQTKTKLDCIEKLIELPFGEFMLSSAQ
QRGNFGGFNGDANRLNRLELTPSHHQQNIRTEAQQLVETNESEQNGNDVELGSPPSKRQC
VALPSDANSSLMKQVARISTMVSSHVTAAAAEAAVTALCEESSFPREIFDGEEYNATNGL
QSPTLHYESASAHQVDGSEMKDELTLSENLDTSAKNDVPLTLRLRAATATALGAAAAHAK
LLADQEQREMENLLATIMETQMKKVHRKIRHFEDLELIMEKQYAEMEEQKECIIGERIDV
LRKTFNSGMSKWKSS
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atggagaccacacacaccaacttgaacttgaaaccagttcgaccaggtgaaccagagctc
gacctatacaccattcccatccaatccagttggtttgcttgggacgatatccacgagacc
gaaaaagtcgctctgagagagttctttgatggcagttcaatctcaagaacgccaagaatc
tacaaggagtatagggacttcatcatcaacaagtacagagaggattcctcacggaggctc
accttcacagaggtccggaagtcactggtggctgatgttagcttgcttaacaaagtgttt
aagttcctggagcagtgggggttaatcaattttggtgtatccattggtaatgatggtgat
ccggtcatggaggttgaggaaaggggaagggttagggttgaggatggtactcccaatggg
gttcgtgtggtggcaatgccaaattcgttgaagccaatttctgtgccacgtagtgtcgag
gggagacaggtggttgataatatacagaaattgccgccgttggcatcctatgctgatact
tttggtgatttggttaagagaaagggtttggtttgcaggaactgtggagaatgttgtggt
tctggttgttatgagggtacgaaggatcattacatgatatgcacaaaatgcttcaataat
ggaaattttggggagaacaaatctgtggatgatttcaagttcattaactgcagtgaaaac
agtggtgacaataaagttgcttggacagaggcagaaactttacttcttttagaatctgtt
ttgaagcatggggataactgggagctagttgcacaaaacgttcaaacaaagactaagctt
gattgtattgagaagctcattgagcttccttttggggaatttatgttgagctctgcccag
caaaggggtaactttggtggctttaatggtgatgctaacaggctaaaccggttggaatta
actccatctcaccatcaacagaatattagaacagaagctcaacaacttgtggaaacaaat
gagagtgagcagaatgggaatgatgttgaactggggtctcctccttccaaaagacaatgt
gttgctttaccttcagatgctaacagttcactgatgaaacaggtagctcgcatctccacg
atggttagttcacatgtcacagcagctgcggctgaggctgctgtgactgcactttgtgag
gaaagctcatttccaagggaaatctttgatggtgaggagtataatgcaaccaatggtctg
caatctccgactctgcattacgagtcagcgagtgcccatcaggttgatggttcagaaatg
aaagacgagcttactttatcagaaaatctggacacttctgccaaaaatgacgtacctcta
acattgcgacttagagctgcgactgcaacagctcttggagcagctgctgctcatgctaaa
ctgttggccgatcaagaacagagagagatggagaatttactggcaacaataatggagaca
cagatgaagaaagtgcaccgcaaaataagacattttgaagatctggagctaattatggag
aaacaatatgctgaaatggaggaacaaaaagagtgtataattggggagcggattgatgta
ctacggaagacatttaattccggaatgtccaaatggaaaagctcataa
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