Tripterygium wilfordii (thunder duke vine): 120004905
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Entry
120004905 CDS
T07256
Name
(RefSeq) probable pectate lyase 5
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
twl
Tripterygium wilfordii (thunder duke vine)
Pathway
twl00040
Pentose and glucuronate interconversions
twl01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
twl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
120004905
Enzymes [BR:
twl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
120004905
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GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
VWC2L_C
NosD
Motif
Other DBs
NCBI-GeneID:
120004905
NCBI-ProteinID:
XP_038710177
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Position
9:4457933..4461048
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AA seq
495 aa
AA seq
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MPNCIVVIAHPRMLLNTCIFLICLFSISLFPLVRGKDHHNLTLLHQHPYPEAVVEDLQRK
VDASLSRRHLLSLKANDKQCLTGNPIDDCWRCDPNWASNRQRLADCAIGFAQGTLGGKGG
QIYVVTDSSDRDPANPTPGTLRHAVIQNEPLWIVFASNMLIKLKHELIFNSYKTVDGRGV
NVQITGNGCFTLQYVSHIIIHNIQIHHCKPSGNTIIASSPTHIGYRSKSDGDGITIFGGQ
KIWIDHCTLSYCTDGLIDATMGSTGITISNNYFSHHNEVMLLGHDDKYVVDTGMQVTIAF
NRFGEALVQRMPRCRLGYIHVVNNDYTSWEMYAIGGSGNPTINSQGNRYIAPADPDAKEV
TKRVETDQQWTGWNWRTEGDIMVNGAYFVPSGGGFTALYAKASSVEPKSAALIEQLTTNA
GAFGGPRYNSEDNYSPGTTTGGTNGGSGDGDFLGMTFGTAAPPSSPPPTSSIFLSLVIIL
ILCTTTINGAPQFAL
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgccgaactgtattgttgttattgctcatccaaggatgcttctcaacacctgcattttc
ttgatatgtctcttctccatctctctctttcctcttgtgagagggaaagaccaccacaat
ttgaccctcctacaccagcatccataccctgaagctgttgttgaagatttgcagaggaaa
gtcgatgcgtcactatcaagaagacaccttctgtctctcaaagcaaatgacaaacaatgt
ctaaccggaaacccaatcgacgactgctggcggtgcgaccccaactgggcaagcaaccgc
caacgcctagctgactgcgcaatagggttcgcacagggaactctaggaggcaagggcggc
cagatctatgtagtcacggactcctccgaccgggacccagcaaatcccactccgggaact
ctccgccacgctgtaatccagaatgaacccctctggattgtctttgcctcaaacatgctt
atcaagctcaagcacgagctcatcttcaacagttacaagaccgtcgatggcagaggcgtc
aatgtccaaattaccggcaatggctgctttacccttcaatacgtgtcccacattatcatc
cacaacatccaaatccaccactgcaagccttcgggcaacacaatcatagcctcctcacct
acccacattggctacagaagcaagtcggacggcgacggaatcaccatcttcggaggccag
aaaatctggatcgatcactgcacactctcttactgtactgacgggctaatcgacgccaca
atgggatcgacggggatcacgatttcgaacaactatttctcgcatcacaatgaggtcatg
ttattggggcacgacgacaaatatgttgtggacaccggaatgcaggtcacgatagcgttc
aatcgattcggcgaggcgctggtgcagcgtatgcctcggtgcagactcgggtacatacac
gtggtcaacaacgattacacttcttgggaaatgtatgctatcggcggtagcggtaacccc
accatcaacagtcagggtaaccgatatattgctccggcggaccctgacgctaaagaggtt
acgaagcgcgtggagacagaccagcaatggacaggatggaattggaggacagagggggac
ataatggtaaatggagcgtactttgtgccgtcgggtggtgggttcacggccctgtacgcc
aaggcctccagtgtcgagcccaagtctgcagctcttattgaacagctcaccacgaacgcc
ggtgcgtttggtggccccaggtacaacagtgaggacaattatagtcctggaaccaccact
ggtgggaccaacggcggcagtggtgatggtgacttcttaggaatgacatttgggaccgcg
gcgccaccgtcatccccaccaccaacatcatctatatttttgtctcttgtgattatttta
attttgtgtacaaccaccattaatggtgctcctcaatttgcattatag
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